Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SIX5Q8N196 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.12■□□□□ 0.97
SIX5Q8N196 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.12■□□□□ 0.97
SIX5Q8N196 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
SIX5Q8N196 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIX5Q8N196 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIX5Q8N196 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIX5Q8N196 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIX5Q8N196 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
SIX5Q8N196 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.11■□□□□ 0.97
SIX5Q8N196 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIX5Q8N196 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.11■□□□□ 0.97
SIX5Q8N196 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SIX5Q8N196 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
SIX5Q8N196 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIX5Q8N196 KRASP1-201ENST00000407852 552 ntBASIC21.11■□□□□ 0.97
SIX5Q8N196 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.11■□□□□ 0.97
SIX5Q8N196 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.11■□□□□ 0.97
SIX5Q8N196 PRKY-204ENST00000533551 1019 ntBASIC21.11■□□□□ 0.97
SIX5Q8N196 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.11■□□□□ 0.97
SIX5Q8N196 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIX5Q8N196 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.11■□□□□ 0.97
SIX5Q8N196 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIX5Q8N196 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX5Q8N196 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.1■□□□□ 0.97
SIX5Q8N196 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX5Q8N196 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.1■□□□□ 0.97
SIX5Q8N196 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.1■□□□□ 0.97
SIX5Q8N196 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.1■□□□□ 0.97
SIX5Q8N196 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.1■□□□□ 0.97
SIX5Q8N196 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
SIX5Q8N196 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SIX5Q8N196 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SIX5Q8N196 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX5Q8N196 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX5Q8N196 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX5Q8N196 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX5Q8N196 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX5Q8N196 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SIX5Q8N196 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SIX5Q8N196 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIX5Q8N196 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.09■□□□□ 0.97
SIX5Q8N196 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.09■□□□□ 0.97
SIX5Q8N196 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SIX5Q8N196 ARMC10P1-201ENST00000313754 855 ntBASIC21.09■□□□□ 0.97
SIX5Q8N196 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.09■□□□□ 0.97
SIX5Q8N196 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 KRT18P35-201ENST00000510488 1269 ntBASIC21.09■□□□□ 0.97
SIX5Q8N196 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.09■□□□□ 0.97
SIX5Q8N196 C2orf69P4-201ENST00000565394 541 ntBASIC21.09■□□□□ 0.97
SIX5Q8N196 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 CD177P1-201ENST00000606252 935 ntBASIC21.09■□□□□ 0.97
SIX5Q8N196 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIX5Q8N196 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.08■□□□□ 0.97
SIX5Q8N196 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.08■□□□□ 0.97
SIX5Q8N196 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIX5Q8N196 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SIX5Q8N196 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SIX5Q8N196 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIX5Q8N196 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIX5Q8N196 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SIX5Q8N196 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SIX5Q8N196 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIX5Q8N196 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.08■□□□□ 0.97
SIX5Q8N196 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.08■□□□□ 0.97
SIX5Q8N196 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SIX5Q8N196 RN7SL850P-201ENST00000579959 291 ntBASIC21.08■□□□□ 0.97
SIX5Q8N196 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.08■□□□□ 0.97
SIX5Q8N196 AC120498.8-201ENST00000614275 531 ntBASIC21.08■□□□□ 0.97
SIX5Q8N196 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SIX5Q8N196 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SIX5Q8N196 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.08■□□□□ 0.96
SIX5Q8N196 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.07■□□□□ 0.96
SIX5Q8N196 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIX5Q8N196 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SIX5Q8N196 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.07■□□□□ 0.96
SIX5Q8N196 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.07■□□□□ 0.96
SIX5Q8N196 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.07■□□□□ 0.96
SIX5Q8N196 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SIX5Q8N196 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.07■□□□□ 0.96
SIX5Q8N196 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SIX5Q8N196 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms