Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC016769.1-201ENST00000409132 1010 ntBASIC19.38■□□□□ 0.69
CCDC116Q8IYX3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC116Q8IYX3 AC091799.1-201ENST00000422823 811 ntBASIC19.38■□□□□ 0.69
CCDC116Q8IYX3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC116Q8IYX3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC116Q8IYX3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC116Q8IYX3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC116Q8IYX3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC116Q8IYX3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC116Q8IYX3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC116Q8IYX3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 KRT18P11-201ENST00000435214 1283 ntBASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 FP700111.2-201ENST00000619190 1892 ntBASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 AC007225.1-201ENST00000566331 1836 ntBASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC116Q8IYX3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC116Q8IYX3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 FEM1AP1-201ENST00000431297 1995 ntBASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC116Q8IYX3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 TERF1P5-201ENST00000477545 1207 ntBASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 AC010536.3-201ENST00000620306 533 ntBASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC116Q8IYX3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC116Q8IYX3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CCDC116Q8IYX3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC116Q8IYX3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC116Q8IYX3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC116Q8IYX3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CCDC116Q8IYX3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC116Q8IYX3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC116Q8IYX3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC116Q8IYX3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC116Q8IYX3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms