Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RP1L1Q8IWN7 C1orf229-201ENST00000623686 2258 ntBASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 KRT18P68-201ENST00000392293 1000 ntBASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 AL353708.3-201ENST00000610272 989 ntBASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RP1L1Q8IWN7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 AC120498.8-201ENST00000614275 531 ntBASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RP1L1Q8IWN7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 CDV3P1-201ENST00000471403 739 ntBASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 AP003071.4-201ENST00000562276 1284 ntBASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RP1L1Q8IWN7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 ARMC10P1-201ENST00000313754 855 ntBASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RP1L1Q8IWN7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.58■□□□□ 0.56
RP1L1Q8IWN7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RP1L1Q8IWN7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RP1L1Q8IWN7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RP1L1Q8IWN7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RP1L1Q8IWN7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.58■□□□□ 0.56
RP1L1Q8IWN7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
RP1L1Q8IWN7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.58■□□□□ 0.56
RP1L1Q8IWN7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RP1L1Q8IWN7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms