Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NUDCD3Q8IVD9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 AC005224.4-201ENST00000583262 1652 ntBASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUDCD3Q8IVD9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 AC138932.1-201ENST00000534164 6830 ntBASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUDCD3Q8IVD9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 AC126544.1-201ENST00000580842 1059 ntBASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUDCD3Q8IVD9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 AC233992.3-201ENST00000607491 485 ntBASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NUDCD3Q8IVD9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 AL356441.2-201ENST00000443009 864 ntBASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NUDCD3Q8IVD9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms