Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RAPH1Q70E73 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.6■□□□□ 0.89
RAPH1Q70E73 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.6■□□□□ 0.89
RAPH1Q70E73 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.6■□□□□ 0.89
RAPH1Q70E73 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.6■□□□□ 0.89
RAPH1Q70E73 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.6■□□□□ 0.89
RAPH1Q70E73 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAPH1Q70E73 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RAPH1Q70E73 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.59■□□□□ 0.89
RAPH1Q70E73 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.59■□□□□ 0.89
RAPH1Q70E73 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.59■□□□□ 0.89
RAPH1Q70E73 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.59■□□□□ 0.89
RAPH1Q70E73 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.59■□□□□ 0.89
RAPH1Q70E73 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 FP700111.2-201ENST00000619190 1892 ntBASIC20.59■□□□□ 0.89
RAPH1Q70E73 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RAPH1Q70E73 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAPH1Q70E73 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RAPH1Q70E73 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAPH1Q70E73 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAPH1Q70E73 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAPH1Q70E73 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RAPH1Q70E73 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RAPH1Q70E73 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RAPH1Q70E73 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.58■□□□□ 0.89
RAPH1Q70E73 SUDS3P1-201ENST00000505831 966 ntBASIC20.58■□□□□ 0.89
RAPH1Q70E73 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAPH1Q70E73 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.58■□□□□ 0.89
RAPH1Q70E73 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RAPH1Q70E73 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RAPH1Q70E73 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAPH1Q70E73 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAPH1Q70E73 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RAPH1Q70E73 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAPH1Q70E73 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAPH1Q70E73 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
RAPH1Q70E73 AC027702.1-201ENST00000563810 1770 ntBASIC20.57■□□□□ 0.88
RAPH1Q70E73 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAPH1Q70E73 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAPH1Q70E73 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAPH1Q70E73 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAPH1Q70E73 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAPH1Q70E73 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAPH1Q70E73 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.57■□□□□ 0.88
RAPH1Q70E73 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.57■□□□□ 0.88
RAPH1Q70E73 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.57■□□□□ 0.88
RAPH1Q70E73 TPRG1LP1-201ENST00000598702 760 ntBASIC20.57■□□□□ 0.88
RAPH1Q70E73 AL139246.5-201ENST00000606645 996 ntBASIC20.57■□□□□ 0.88
RAPH1Q70E73 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAPH1Q70E73 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.57■□□□□ 0.88
RAPH1Q70E73 AL358852.1-201ENST00000623174 1268 ntBASIC20.57■□□□□ 0.88
RAPH1Q70E73 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RAPH1Q70E73 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAPH1Q70E73 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAPH1Q70E73 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAPH1Q70E73 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAPH1Q70E73 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAPH1Q70E73 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAPH1Q70E73 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAPH1Q70E73 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAPH1Q70E73 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 AC142381.2-201ENST00000566120 298 ntBASIC20.56■□□□□ 0.88
RAPH1Q70E73 AC008175.2-201ENST00000612840 297 ntBASIC20.56■□□□□ 0.88
RAPH1Q70E73 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 MIR6084-201ENST00000622012 110 ntBASIC20.56■□□□□ 0.88
RAPH1Q70E73 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms