Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.92□□□□□ -0.34
HSPG2P98160 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 AC003102.1-202ENST00000563394 1796 ntBASIC12.92□□□□□ -0.34
HSPG2P98160 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HSPG2P98160 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.92□□□□□ -0.34
HSPG2P98160 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC12.92□□□□□ -0.34
HSPG2P98160 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 LTK-203ENST00000453182 2412 ntTSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HSPG2P98160 SAPCD2P1-201ENST00000395413 1184 ntBASIC12.92□□□□□ -0.34
HSPG2P98160 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HSPG2P98160 MIR1238-201ENST00000408483 83 ntBASIC12.92□□□□□ -0.34
HSPG2P98160 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.92□□□□□ -0.34
HSPG2P98160 AC073195.1-201ENST00000607241 877 ntBASIC12.92□□□□□ -0.34
HSPG2P98160 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.92□□□□□ -0.34
HSPG2P98160 AC027702.1-201ENST00000563810 1770 ntBASIC12.92□□□□□ -0.34
HSPG2P98160 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HSPG2P98160 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.91□□□□□ -0.34
HSPG2P98160 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HSPG2P98160 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.91□□□□□ -0.34
HSPG2P98160 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.91□□□□□ -0.34
HSPG2P98160 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HSPG2P98160 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
HSPG2P98160 AC124283.5-201ENST00000624661 1809 ntBASIC12.91□□□□□ -0.34
HSPG2P98160 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HSPG2P98160 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.91□□□□□ -0.34
HSPG2P98160 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HSPG2P98160 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HSPG2P98160 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HSPG2P98160 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HSPG2P98160 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HSPG2P98160 ANOS2P-203ENST00000472227 1816 ntBASIC12.91□□□□□ -0.34
HSPG2P98160 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HSPG2P98160 AL031133.1-201ENST00000406807 723 ntBASIC12.9□□□□□ -0.34
HSPG2P98160 AL450487.1-201ENST00000426799 995 ntBASIC12.9□□□□□ -0.34
HSPG2P98160 CDV3P1-201ENST00000471403 739 ntBASIC12.9□□□□□ -0.34
HSPG2P98160 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.9□□□□□ -0.34
HSPG2P98160 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
HSPG2P98160 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.9□□□□□ -0.34
HSPG2P98160 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HSPG2P98160 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.9□□□□□ -0.34
HSPG2P98160 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HSPG2P98160 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HSPG2P98160 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HSPG2P98160 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HSPG2P98160 AP000347.1-202ENST00000435868 847 ntBASIC12.9□□□□□ -0.34
HSPG2P98160 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.9□□□□□ -0.34
HSPG2P98160 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HSPG2P98160 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.9□□□□□ -0.34
HSPG2P98160 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HSPG2P98160 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HSPG2P98160 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC12.9□□□□□ -0.34
HSPG2P98160 KRT16P5-201ENST00000455284 522 ntBASIC12.9□□□□□ -0.35
HSPG2P98160 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.9□□□□□ -0.35
HSPG2P98160 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.9□□□□□ -0.35
HSPG2P98160 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.9□□□□□ -0.35
HSPG2P98160 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
HSPG2P98160 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
HSPG2P98160 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC12.89□□□□□ -0.35
HSPG2P98160 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HSPG2P98160 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HSPG2P98160 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HSPG2P98160 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.89□□□□□ -0.35
HSPG2P98160 AL353807.1-201ENST00000427475 662 ntBASIC12.89□□□□□ -0.35
HSPG2P98160 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.89□□□□□ -0.35
HSPG2P98160 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HSPG2P98160 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.89□□□□□ -0.35
HSPG2P98160 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.89□□□□□ -0.35
HSPG2P98160 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.89□□□□□ -0.35
HSPG2P98160 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HSPG2P98160 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC12.89□□□□□ -0.35
HSPG2P98160 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.89□□□□□ -0.35
HSPG2P98160 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HSPG2P98160 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HSPG2P98160 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
HSPG2P98160 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.89□□□□□ -0.35
HSPG2P98160 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HSPG2P98160 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HSPG2P98160 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.88□□□□□ -0.35
HSPG2P98160 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
HSPG2P98160 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HSPG2P98160 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HSPG2P98160 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms