Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.02□□□□□ -0.33
UBE2AP49459 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
UBE2AP49459 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
UBE2AP49459 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
UBE2AP49459 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.02□□□□□ -0.33
UBE2AP49459 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBE2AP49459 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UBE2AP49459 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.01□□□□□ -0.33
UBE2AP49459 AC012414.1-201ENST00000556676 535 ntBASIC13.01□□□□□ -0.33
UBE2AP49459 AL358852.1-201ENST00000623174 1268 ntBASIC13.01□□□□□ -0.33
UBE2AP49459 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UBE2AP49459 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.01□□□□□ -0.33
UBE2AP49459 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UBE2AP49459 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBE2AP49459 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBE2AP49459 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 AF106564.1-201ENST00000607058 2553 ntBASIC13□□□□□ -0.33
UBE2AP49459 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBE2AP49459 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
UBE2AP49459 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13□□□□□ -0.33
UBE2AP49459 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBE2AP49459 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13□□□□□ -0.33
UBE2AP49459 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13□□□□□ -0.33
UBE2AP49459 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
UBE2AP49459 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13□□□□□ -0.33
UBE2AP49459 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
UBE2AP49459 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC13□□□□□ -0.33
UBE2AP49459 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UBE2AP49459 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
UBE2AP49459 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBE2AP49459 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC12.99□□□□□ -0.33
UBE2AP49459 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
UBE2AP49459 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
UBE2AP49459 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UBE2AP49459 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
UBE2AP49459 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
UBE2AP49459 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
UBE2AP49459 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 NT5C3AP1-201ENST00000394500 1012 ntBASIC12.99□□□□□ -0.33
UBE2AP49459 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC12.99□□□□□ -0.33
UBE2AP49459 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC12.99□□□□□ -0.33
UBE2AP49459 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC12.99□□□□□ -0.33
UBE2AP49459 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
UBE2AP49459 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
UBE2AP49459 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
UBE2AP49459 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBE2AP49459 STX5-203ENST00000394690 1568 ntTSL 5 BASIC12.98□□□□□ -0.33
UBE2AP49459 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC12.98□□□□□ -0.33
UBE2AP49459 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2AP49459 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2AP49459 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms