Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.4■□□□□ 0.7
NCK1P16333 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.4■□□□□ 0.7
NCK1P16333 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NCK1P16333 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.4■□□□□ 0.7
NCK1P16333 AC009237.3-201ENST00000393279 1427 ntBASIC19.4■□□□□ 0.7
NCK1P16333 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.4■□□□□ 0.7
NCK1P16333 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NCK1P16333 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCK1P16333 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
NCK1P16333 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.4■□□□□ 0.7
NCK1P16333 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NCK1P16333 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
NCK1P16333 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
NCK1P16333 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NCK1P16333 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.39■□□□□ 0.69
NCK1P16333 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NCK1P16333 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.39■□□□□ 0.69
NCK1P16333 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NCK1P16333 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.39■□□□□ 0.69
NCK1P16333 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.39■□□□□ 0.69
NCK1P16333 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.39■□□□□ 0.69
NCK1P16333 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.39■□□□□ 0.69
NCK1P16333 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 AC011484.1-201ENST00000377652 1995 ntBASIC19.39■□□□□ 0.69
NCK1P16333 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
NCK1P16333 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCK1P16333 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
NCK1P16333 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCK1P16333 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCK1P16333 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NCK1P16333 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.38■□□□□ 0.69
NCK1P16333 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCK1P16333 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCK1P16333 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NCK1P16333 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NCK1P16333 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.38■□□□□ 0.69
NCK1P16333 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.38■□□□□ 0.69
NCK1P16333 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NCK1P16333 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NCK1P16333 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCK1P16333 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.38■□□□□ 0.69
NCK1P16333 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCK1P16333 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NCK1P16333 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NCK1P16333 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NCK1P16333 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NCK1P16333 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
NCK1P16333 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.37■□□□□ 0.69
NCK1P16333 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.37■□□□□ 0.69
NCK1P16333 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NCK1P16333 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.37■□□□□ 0.69
NCK1P16333 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NCK1P16333 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.37■□□□□ 0.69
NCK1P16333 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 TCF3P1-201ENST00000423021 1937 ntBASIC19.37■□□□□ 0.69
NCK1P16333 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.37■□□□□ 0.69
NCK1P16333 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NCK1P16333 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCK1P16333 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCK1P16333 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NCK1P16333 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.36■□□□□ 0.69
NCK1P16333 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCK1P16333 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.36■□□□□ 0.69
NCK1P16333 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCK1P16333 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCK1P16333 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCK1P16333 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NCK1P16333 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.36■□□□□ 0.69
NCK1P16333 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.36■□□□□ 0.69
NCK1P16333 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NCK1P16333 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCK1P16333 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.36■□□□□ 0.69
NCK1P16333 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.36■□□□□ 0.69
NCK1P16333 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms