Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
DEFA4P12838 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.66■□□□□ 0.26
DEFA4P12838 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.66■□□□□ 0.26
DEFA4P12838 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.66■□□□□ 0.26
DEFA4P12838 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.66■□□□□ 0.26
DEFA4P12838 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.66■□□□□ 0.26
DEFA4P12838 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEFA4P12838 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.66■□□□□ 0.26
DEFA4P12838 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEFA4P12838 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DEFA4P12838 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
DEFA4P12838 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.66■□□□□ 0.26
DEFA4P12838 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.65■□□□□ 0.26
DEFA4P12838 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
DEFA4P12838 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.65■□□□□ 0.26
DEFA4P12838 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.65■□□□□ 0.26
DEFA4P12838 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 SUDS3P1-201ENST00000505831 966 ntBASIC16.65■□□□□ 0.26
DEFA4P12838 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.65■□□□□ 0.26
DEFA4P12838 AL031432.3-201ENST00000607698 485 ntBASIC16.65■□□□□ 0.26
DEFA4P12838 AL354811.1-201ENST00000610286 706 ntBASIC16.65■□□□□ 0.26
DEFA4P12838 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.65■□□□□ 0.26
DEFA4P12838 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 AC005224.4-201ENST00000583262 1652 ntBASIC16.65■□□□□ 0.26
DEFA4P12838 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
DEFA4P12838 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
DEFA4P12838 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.65■□□□□ 0.26
DEFA4P12838 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
DEFA4P12838 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.65■□□□□ 0.26
DEFA4P12838 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.65■□□□□ 0.26
DEFA4P12838 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.65■□□□□ 0.26
DEFA4P12838 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DEFA4P12838 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
DEFA4P12838 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
DEFA4P12838 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.64■□□□□ 0.25
DEFA4P12838 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
DEFA4P12838 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
DEFA4P12838 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
DEFA4P12838 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
DEFA4P12838 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.64■□□□□ 0.25
DEFA4P12838 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.64■□□□□ 0.25
DEFA4P12838 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.64■□□□□ 0.25
DEFA4P12838 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.64■□□□□ 0.25
DEFA4P12838 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
DEFA4P12838 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.64■□□□□ 0.25
DEFA4P12838 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.64■□□□□ 0.25
DEFA4P12838 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 AL049796.1-201ENST00000565336 1766 ntBASIC16.64■□□□□ 0.25
DEFA4P12838 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.64■□□□□ 0.25
DEFA4P12838 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DEFA4P12838 AC073314.1-201ENST00000568729 2216 ntBASIC16.64■□□□□ 0.25
DEFA4P12838 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
DEFA4P12838 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.63■□□□□ 0.25
DEFA4P12838 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
DEFA4P12838 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.63■□□□□ 0.25
DEFA4P12838 AC005837.3-201ENST00000612163 286 ntBASIC16.63■□□□□ 0.25
DEFA4P12838 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
DEFA4P12838 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.63■□□□□ 0.25
DEFA4P12838 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DEFA4P12838 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms