Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 GABARAPL3-202ENST00000624044 1851 ntBASIC19.22■□□□□ 0.67
HMGN2P05204 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN2P05204 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN2P05204 AC027702.1-201ENST00000563810 1770 ntBASIC19.21■□□□□ 0.67
HMGN2P05204 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
HMGN2P05204 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN2P05204 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN2P05204 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HMGN2P05204 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN2P05204 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN2P05204 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN2P05204 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN2P05204 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGN2P05204 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
HMGN2P05204 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGN2P05204 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HMGN2P05204 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HMGN2P05204 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGN2P05204 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN2P05204 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HMGN2P05204 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
HMGN2P05204 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN2P05204 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN2P05204 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HMGN2P05204 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN2P05204 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN2P05204 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGN2P05204 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGN2P05204 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN2P05204 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN2P05204 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.2■□□□□ 0.66
HMGN2P05204 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.2■□□□□ 0.66
HMGN2P05204 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGN2P05204 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.2■□□□□ 0.66
HMGN2P05204 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.2■□□□□ 0.66
HMGN2P05204 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN2P05204 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN2P05204 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGN2P05204 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN2P05204 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGN2P05204 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HMGN2P05204 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.2■□□□□ 0.66
HMGN2P05204 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
HMGN2P05204 AC091799.1-201ENST00000422823 811 ntBASIC19.19■□□□□ 0.66
HMGN2P05204 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGN2P05204 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.19■□□□□ 0.66
HMGN2P05204 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.19■□□□□ 0.66
HMGN2P05204 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
HMGN2P05204 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGN2P05204 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.19■□□□□ 0.66
HMGN2P05204 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HMGN2P05204 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HMGN2P05204 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HMGN2P05204 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGN2P05204 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGN2P05204 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HMGN2P05204 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HMGN2P05204 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HMGN2P05204 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN2P05204 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN2P05204 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HMGN2P05204 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN2P05204 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN2P05204 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.18■□□□□ 0.66
HMGN2P05204 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN2P05204 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGN2P05204 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.18■□□□□ 0.66
HMGN2P05204 MYCNOS-205ENST00000641950 531 ntBASIC19.18■□□□□ 0.66
HMGN2P05204 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN2P05204 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.18■□□□□ 0.66
HMGN2P05204 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGN2P05204 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.18■□□□□ 0.66
HMGN2P05204 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.18■□□□□ 0.66
HMGN2P05204 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN2P05204 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
HMGN2P05204 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGN2P05204 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN2P05204 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN2P05204 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN2P05204 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN2P05204 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN2P05204 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN2P05204 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGN2P05204 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HMGN2P05204 AC026271.2-201ENST00000428091 497 ntBASIC19.17■□□□□ 0.66
HMGN2P05204 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGN2P05204 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGN2P05204 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms