Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
HCN1O60741 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.16■□□□□ 0.66
HCN1O60741 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.16■□□□□ 0.66
HCN1O60741 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.16■□□□□ 0.66
HCN1O60741 CROCCP5-201ENST00000436658 830 ntBASIC19.16■□□□□ 0.66
HCN1O60741 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.16■□□□□ 0.66
HCN1O60741 DUX4L16-201ENST00000555130 1264 ntBASIC19.16■□□□□ 0.66
HCN1O60741 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.16■□□□□ 0.66
HCN1O60741 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
HCN1O60741 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HCN1O60741 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.16■□□□□ 0.66
HCN1O60741 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
HCN1O60741 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
HCN1O60741 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.16■□□□□ 0.66
HCN1O60741 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HCN1O60741 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCN1O60741 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.16■□□□□ 0.66
HCN1O60741 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HCN1O60741 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN1O60741 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN1O60741 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HCN1O60741 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN1O60741 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN1O60741 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HCN1O60741 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN1O60741 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HCN1O60741 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.15■□□□□ 0.66
HCN1O60741 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.15■□□□□ 0.66
HCN1O60741 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.15■□□□□ 0.66
HCN1O60741 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
HCN1O60741 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.15■□□□□ 0.66
HCN1O60741 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.15■□□□□ 0.66
HCN1O60741 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.15■□□□□ 0.66
HCN1O60741 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.15■□□□□ 0.66
HCN1O60741 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN1O60741 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HCN1O60741 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.15■□□□□ 0.66
HCN1O60741 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.15■□□□□ 0.66
HCN1O60741 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.14■□□□□ 0.66
HCN1O60741 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.14■□□□□ 0.65
HCN1O60741 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HCN1O60741 AC007322.1-201ENST00000426983 750 ntBASIC19.14■□□□□ 0.65
HCN1O60741 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.14■□□□□ 0.65
HCN1O60741 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.14■□□□□ 0.65
HCN1O60741 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.14■□□□□ 0.65
HCN1O60741 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HCN1O60741 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.14■□□□□ 0.65
HCN1O60741 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.14■□□□□ 0.65
HCN1O60741 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.14■□□□□ 0.65
HCN1O60741 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 AL049796.1-201ENST00000565336 1766 ntBASIC19.14■□□□□ 0.65
HCN1O60741 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HCN1O60741 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HCN1O60741 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.13■□□□□ 0.65
HCN1O60741 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HCN1O60741 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HCN1O60741 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.13■□□□□ 0.65
HCN1O60741 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HCN1O60741 MIR663A-201ENST00000385250 93 ntBASIC19.13■□□□□ 0.65
HCN1O60741 NCF1B-203ENST00000435988 1254 ntBASIC19.13■□□□□ 0.65
HCN1O60741 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.13■□□□□ 0.65
HCN1O60741 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.13■□□□□ 0.65
HCN1O60741 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.13■□□□□ 0.65
HCN1O60741 AC008175.2-201ENST00000612840 297 ntBASIC19.13■□□□□ 0.65
HCN1O60741 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
HCN1O60741 AC120498.10-201ENST00000621827 505 ntBASIC19.13■□□□□ 0.65
HCN1O60741 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.13■□□□□ 0.65
HCN1O60741 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.13■□□□□ 0.65
HCN1O60741 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HCN1O60741 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HCN1O60741 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HCN1O60741 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
HCN1O60741 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HCN1O60741 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.13■□□□□ 0.65
HCN1O60741 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HCN1O60741 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HCN1O60741 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms