Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKNO60260 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.15■□□□□ 0.66
PRKNO60260 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.15■□□□□ 0.66
PRKNO60260 AC098934.4-201ENST00000564127 592 ntBASIC19.15■□□□□ 0.66
PRKNO60260 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKNO60260 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRKNO60260 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.15■□□□□ 0.66
PRKNO60260 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKNO60260 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRKNO60260 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
PRKNO60260 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PRKNO60260 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKNO60260 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKNO60260 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKNO60260 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKNO60260 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PRKNO60260 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PRKNO60260 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRKNO60260 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.14■□□□□ 0.65
PRKNO60260 SLC29A4P1-201ENST00000398760 971 ntBASIC19.14■□□□□ 0.65
PRKNO60260 AC007322.3-201ENST00000426526 701 ntBASIC19.14■□□□□ 0.65
PRKNO60260 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.14■□□□□ 0.65
PRKNO60260 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.14■□□□□ 0.65
PRKNO60260 CDV3P1-201ENST00000471403 739 ntBASIC19.14■□□□□ 0.65
PRKNO60260 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PRKNO60260 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.14■□□□□ 0.65
PRKNO60260 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.14■□□□□ 0.65
PRKNO60260 AC142086.2-201ENST00000569753 217 ntBASIC19.14■□□□□ 0.65
PRKNO60260 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.14■□□□□ 0.65
PRKNO60260 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.14■□□□□ 0.65
PRKNO60260 FAM21FP-204ENST00000608637 956 ntBASIC19.14■□□□□ 0.65
PRKNO60260 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKNO60260 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRKNO60260 AC010980.2-201ENST00000587099 1412 ntBASIC19.14■□□□□ 0.65
PRKNO60260 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PRKNO60260 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRKNO60260 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.13■□□□□ 0.65
PRKNO60260 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PRKNO60260 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PRKNO60260 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRKNO60260 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRKNO60260 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.13■□□□□ 0.65
PRKNO60260 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.13■□□□□ 0.65
PRKNO60260 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.13■□□□□ 0.65
PRKNO60260 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
PRKNO60260 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.13■□□□□ 0.65
PRKNO60260 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRKNO60260 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.13■□□□□ 0.65
PRKNO60260 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRKNO60260 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRKNO60260 AC116050.2-201ENST00000612102 1779 ntBASIC19.13■□□□□ 0.65
PRKNO60260 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRKNO60260 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.13■□□□□ 0.65
PRKNO60260 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.13■□□□□ 0.65
PRKNO60260 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRKNO60260 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.12■□□□□ 0.65
PRKNO60260 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRKNO60260 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
PRKNO60260 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRKNO60260 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRKNO60260 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRKNO60260 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRKNO60260 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRKNO60260 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRKNO60260 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.12■□□□□ 0.65
PRKNO60260 MIPEPP3-201ENST00000412105 444 ntBASIC19.12■□□□□ 0.65
PRKNO60260 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PRKNO60260 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRKNO60260 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRKNO60260 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRKNO60260 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRKNO60260 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRKNO60260 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRKNO60260 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.11■□□□□ 0.65
PRKNO60260 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PRKNO60260 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PRKNO60260 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PRKNO60260 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PRKNO60260 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.11■□□□□ 0.65
PRKNO60260 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRKNO60260 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PRKNO60260 AL355472.2-201ENST00000422958 438 ntBASIC19.11■□□□□ 0.65
PRKNO60260 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.11■□□□□ 0.65
PRKNO60260 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.11■□□□□ 0.65
PRKNO60260 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.11■□□□□ 0.65
PRKNO60260 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRKNO60260 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRKNO60260 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.11■□□□□ 0.65
PRKNO60260 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRKNO60260 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRKNO60260 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRKNO60260 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRKNO60260 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRKNO60260 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.1■□□□□ 0.65
PRKNO60260 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRKNO60260 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PRKNO60260 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRKNO60260 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRKNO60260 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.1■□□□□ 0.65
PRKNO60260 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms