Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 AL136967.2-201ENST00000623968 743 ntBASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 AP005212.1-201ENST00000581547 1997 ntBASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF103-CHMP3A0A140T963 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RNF103-CHMP3A0A140T963 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 AC073314.1-201ENST00000568729 2216 ntBASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.73■□□□□ 0.75
RNF103-CHMP3A0A140T963 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
RNF103-CHMP3A0A140T963 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 AL139246.5-201ENST00000606645 996 ntBASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF103-CHMP3A0A140T963 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 SUDS3P1-201ENST00000505831 966 ntBASIC19.7■□□□□ 0.74
RNF103-CHMP3A0A140T963 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms