Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 AC133561.4-201ENST00000566112 224 ntBASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 AL512631.2-201ENST00000604634 923 ntBASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV1-2A0A0B4J238 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 AC125437.2-201ENST00000625180 2167 ntBASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV1-2A0A0B4J238 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 AC098818.2-201ENST00000564925 2320 ntBASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV1-2A0A0B4J238 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV1-2A0A0B4J238 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 AP004607.4-201ENST00000530158 1459 ntBASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 RARRES2P1-201ENST00000474487 481 ntBASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV1-2A0A0B4J238 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms