Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CU633906.4-201ENST00000624484 1023 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 HLA-B-257ENST00000640094 147 ntBASIC9.93□□□□□ -0.82
MTHFRP42898 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
MTHFRP42898 SLU7-201ENST00000297151 3793 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
MTHFRP42898 ZNF138-202ENST00000359735 2679 ntTSL 4 BASIC9.93□□□□□ -0.82
MTHFRP42898 SLC34A2-201ENST00000382051 4122 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 FAM180A-201ENST00000338588 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 B4GALNT2-203ENST00000504681 1819 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
MTHFRP42898 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 CYP4A11-202ENST00000371904 1760 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
MTHFRP42898 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
MTHFRP42898 PSMA3-AS1-214ENST00000557660 2360 ntTSL 2 BASIC9.93□□□□□ -0.82
MTHFRP42898 SPO11-202ENST00000371260 1608 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
MTHFRP42898 UPRT-202ENST00000373379 2234 ntTSL 2 BASIC9.92□□□□□ -0.82
MTHFRP42898 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 PRR23D2-201ENST00000528972 1587 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
MTHFRP42898 PRR23D1-201ENST00000533250 1587 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
MTHFRP42898 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 CNR1-206ENST00000549890 2122 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
MTHFRP42898 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 AL096869.3-201ENST00000567837 2626 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 ADH4-201ENST00000265512 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 LINC01998-201ENST00000464673 1967 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 SEC22C-201ENST00000264454 1380 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 CLEC4M-205ENST00000394122 1898 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 IDSP1-201ENST00000324799 376 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 HIST1H4H-201ENST00000377727 397 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
MTHFRP42898 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 IGKV1D-35-201ENST00000442736 271 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 RN7SL419P-201ENST00000471592 287 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 PTPRG-AS1-209ENST00000495542 502 ntTSL 4 BASIC9.92□□□□□ -0.82
MTHFRP42898 LINC02115-201ENST00000503367 432 ntTSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 AC146949.1-201ENST00000505946 423 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 AC146944.1-201ENST00000508439 418 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 GJA1P1-201ENST00000511478 1143 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 RPL23AP96-201ENST00000514593 591 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 AC090099.3-201ENST00000524640 979 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 AC044839.2-201ENST00000531982 534 ntTSL 3 BASIC9.92□□□□□ -0.82
MTHFRP42898 LMO3-222ENST00000540445 906 ntTSL 2 BASIC9.92□□□□□ -0.82
MTHFRP42898 RAB6A-209ENST00000541973 1104 ntTSL 2 BASIC9.92□□□□□ -0.82
MTHFRP42898 AC055716.1-201ENST00000550077 495 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 AL137779.1-201ENST00000556205 599 ntTSL 3 BASIC9.92□□□□□ -0.82
MTHFRP42898 MIR4440-201ENST00000583986 98 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 AC003991.1-203ENST00000591739 719 ntTSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 OR7E108P-201ENST00000605227 991 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 TTR-204ENST00000610404 1040 ntTSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 TTR-205ENST00000613781 556 ntTSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 NELFE-214ENST00000625905 111 ntTSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 RBBP8-204ENST00000399722 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 ABI2-211ENST00000422511 2718 ntTSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 BTN2A1-204ENST00000469185 1687 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 SLC7A13-202ENST00000419776 1618 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 PCLO-209ENST00000618073 1614 ntTSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
MTHFRP42898 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC9.92□□□□□ -0.82
MTHFRP42898 MICAL2-231ENST00000537344 3774 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 RNF185-203ENST00000426256 3315 ntTSL 2 BASIC9.92□□□□□ -0.82
MTHFRP42898 DHRS9-208ENST00000602501 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 MMP1-201ENST00000315274 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 LINC02006-202ENST00000492569 1958 ntTSL 2 BASIC9.92□□□□□ -0.82
MTHFRP42898 AC139700.1-201ENST00000605810 1540 ntBASIC9.92□□□□□ -0.82
MTHFRP42898 ASTN1-204ENST00000424564 3685 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 LINC02068-201ENST00000418839 3212 ntTSL 2 BASIC9.92□□□□□ -0.82
MTHFRP42898 GGA3-201ENST00000537686 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
MTHFRP42898 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC9.92□□□□□ -0.82
MTHFRP42898 CORO2B-203ENST00000543950 3611 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
MTHFRP42898 OLFM5P-201ENST00000411807 1478 ntBASIC9.91□□□□□ -0.82
MTHFRP42898 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 SLC25A44-201ENST00000359511 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 SLC22A14-201ENST00000273173 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 ANXA7-202ENST00000372921 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 PSMC1P9-201ENST00000396338 1335 ntBASIC9.91□□□□□ -0.82
MTHFRP42898 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
MTHFRP42898 LCLAT1-202ENST00000319406 2774 ntTSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 LINC00470-201ENST00000412816 2031 ntTSL 2 BASIC9.91□□□□□ -0.82
MTHFRP42898 AC211476.4-201ENST00000275546 699 ntBASIC9.91□□□□□ -0.82
MTHFRP42898 PTH-201ENST00000282091 813 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 OR56B4-201ENST00000316529 1152 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
MTHFRP42898 S100A7A-201ENST00000329256 491 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
MTHFRP42898 RABL2A-201ENST00000376439 623 ntTSL 5 BASIC9.91□□□□□ -0.82
MTHFRP42898 CEBPZOS-201ENST00000392061 695 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
MTHFRP42898 PMS2P5-201ENST00000398065 516 ntBASIC9.91□□□□□ -0.82
MTHFRP42898 ZNF839P1-201ENST00000403487 861 ntBASIC9.91□□□□□ -0.82
MTHFRP42898 AL031777.1-201ENST00000405418 499 ntBASIC9.91□□□□□ -0.82
MTHFRP42898 RNA5SP29-201ENST00000410988 106 ntBASIC9.91□□□□□ -0.82
MTHFRP42898 AC106017.1-202ENST00000424109 428 ntTSL 5 BASIC9.91□□□□□ -0.82
MTHFRP42898 MYL6BP1-201ENST00000429485 615 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms