RNA–Protein interactions for RNA: ENST00000396338.3

PSMC1P9-201, Transcript of proteasome 26S subunit, ATPase 1 pseudogene 9, humanhuman

BASIC

Gene PSMC1P9, Length 1,335 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1P9-201ENST00000396338 AEBP2Q6ZN18 517 aaPredicted RBP29.01■■■□□ 2.23
PSMC1P9-201ENST00000396338 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
PSMC1P9-201ENST00000396338 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
PSMC1P9-201ENST00000396338 PHF23Q9BUL5 403 aaPredicted RBP24.52■■□□□ 1.52
PSMC1P9-201ENST00000396338 FOXD1Q16676 465 aa23.17■■□□□ 1.3
PSMC1P9-201ENST00000396338 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
PSMC1P9-201ENST00000396338 MSH5O43196 834 aa21.92■■□□□ 1.1
PSMC1P9-201ENST00000396338 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
PSMC1P9-201ENST00000396338 POTEDQ86YR6 584 aa21.86■■□□□ 1.09
PSMC1P9-201ENST00000396338 PIAS4Q8N2W9 510 aaPredicted RBP21.68■■□□□ 1.06
PSMC1P9-201ENST00000396338 PPP6R1Q9UPN7 881 aa21.43■■□□□ 1.02
PSMC1P9-201ENST00000396338 ADRA2BP18089 450 aa21.39■■□□□ 1.01
PSMC1P9-201ENST00000396338 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
PSMC1P9-201ENST00000396338 DMRT2Q9Y5R5 561 aa19.71■□□□□ 0.75
PSMC1P9-201ENST00000396338 MAPK8IP2Q13387 824 aaPredicted RBP19.68■□□□□ 0.74
PSMC1P9-201ENST00000396338 CCDC180Q9P1Z9 1646 aa19.45■□□□□ 0.7
PSMC1P9-201ENST00000396338 ABCC9O60706 1549 aa19.12■□□□□ 0.65
PSMC1P9-201ENST00000396338 PPP4R3CPQ6ZMV5 832 aa19.11■□□□□ 0.65
PSMC1P9-201ENST00000396338 DCAF8L1A6NGE4 600 aa18.97■□□□□ 0.63
PSMC1P9-201ENST00000396338 CACNB1Q02641 598 aaPredicted RBP18.91■□□□□ 0.62
PSMC1P9-201ENST00000396338 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
PSMC1P9-201ENST00000396338 CNKSR2Q8WXI2 1034 aa18.85■□□□□ 0.61
PSMC1P9-201ENST00000396338 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
PSMC1P9-201ENST00000396338 RNF39Q9H2S5 420 aa18.59■□□□□ 0.57
PSMC1P9-201ENST00000396338 DCAF8L2P0C7V8 631 aa18.52■□□□□ 0.56
PSMC1P9-201ENST00000396338 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
PSMC1P9-201ENST00000396338 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
PSMC1P9-201ENST00000396338 C1QBPQ07021 282 aaKnown RBP18.38■□□□□ 0.53
PSMC1P9-201ENST00000396338 NACADO15069 1562 aa18.37■□□□□ 0.53
PSMC1P9-201ENST00000396338 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
PSMC1P9-201ENST00000396338 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.51
PSMC1P9-201ENST00000396338 MYO15BQ96JP2 1530 aa18.26■□□□□ 0.51
PSMC1P9-201ENST00000396338 DCAF1Q9Y4B6 1507 aa18.17■□□□□ 0.5
PSMC1P9-201ENST00000396338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.48
PSMC1P9-201ENST00000396338 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
PSMC1P9-201ENST00000396338 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
PSMC1P9-201ENST00000396338 SCRIBQ14160 1630 aa17.77■□□□□ 0.44
PSMC1P9-201ENST00000396338 UNC13AQ9UPW8 1703 aa17.74■□□□□ 0.43
PSMC1P9-201ENST00000396338 BICRAQ9NZM4 1560 aa17.71■□□□□ 0.43
PSMC1P9-201ENST00000396338 SHROOM4Q9ULL8 1493 aa17.68■□□□□ 0.42
PSMC1P9-201ENST00000396338 U3KPZ7 1027 aaPredicted RBP17.57■□□□□ 0.4
PSMC1P9-201ENST00000396338 KCNA4P22459 653 aa17.47■□□□□ 0.39
PSMC1P9-201ENST00000396338 CAPN15O75808 1086 aa17.44■□□□□ 0.38
PSMC1P9-201ENST00000396338 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
PSMC1P9-201ENST00000396338 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
PSMC1P9-201ENST00000396338 DSG3P32926 999 aa17.32■□□□□ 0.36
PSMC1P9-201ENST00000396338 APLP2Q06481 763 aa17.28■□□□□ 0.36
PSMC1P9-201ENST00000396338 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
PSMC1P9-201ENST00000396338 SLC4A2P04920 1241 aa17.22■□□□□ 0.35
PSMC1P9-201ENST00000396338 CECR2Q9BXF3 1484 aa17.2■□□□□ 0.34
PSMC1P9-201ENST00000396338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
PSMC1P9-201ENST00000396338 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
PSMC1P9-201ENST00000396338 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
PSMC1P9-201ENST00000396338 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
PSMC1P9-201ENST00000396338 BAZ1AQ9NRL2 1556 aaPredicted RBP17.04■□□□□ 0.32
PSMC1P9-201ENST00000396338 POTEHQ6S545 545 aa17.03■□□□□ 0.32
PSMC1P9-201ENST00000396338 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
PSMC1P9-201ENST00000396338 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
PSMC1P9-201ENST00000396338 NCAPD3P42695 1498 aa16.97■□□□□ 0.31
PSMC1P9-201ENST00000396338 ABCB7O75027 752 aa16.96■□□□□ 0.31
PSMC1P9-201ENST00000396338 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
PSMC1P9-201ENST00000396338 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
PSMC1P9-201ENST00000396338 MROH2BQ7Z745 1585 aa16.88■□□□□ 0.29
PSMC1P9-201ENST00000396338 BAZ1BQ9UIG0 1483 aaKnown RBP16.85■□□□□ 0.29
PSMC1P9-201ENST00000396338 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
PSMC1P9-201ENST00000396338 PEG3Q9GZU2 1588 aa16.83■□□□□ 0.28
PSMC1P9-201ENST00000396338 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
PSMC1P9-201ENST00000396338 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
PSMC1P9-201ENST00000396338 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
PSMC1P9-201ENST00000396338 WIZO95785 1651 aa16.66■□□□□ 0.26
PSMC1P9-201ENST00000396338 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
PSMC1P9-201ENST00000396338 POLA2Q14181 598 aa16.56■□□□□ 0.24
PSMC1P9-201ENST00000396338 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
PSMC1P9-201ENST00000396338 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.24
PSMC1P9-201ENST00000396338 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.23
PSMC1P9-201ENST00000396338 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
PSMC1P9-201ENST00000396338 NESP48681 1621 aa16.49■□□□□ 0.23
PSMC1P9-201ENST00000396338 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
PSMC1P9-201ENST00000396338 FOXD4L1Q9NU39 408 aa16.45■□□□□ 0.22
PSMC1P9-201ENST00000396338 SUPT5HO00267 1087 aaKnown RBP16.43■□□□□ 0.22
PSMC1P9-201ENST00000396338 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
PSMC1P9-201ENST00000396338 CFTRP13569 1480 aa16.37■□□□□ 0.21
PSMC1P9-201ENST00000396338 ZBTB12Q9Y330 459 aaPredicted RBP16.35■□□□□ 0.21
PSMC1P9-201ENST00000396338 CUX2O14529 1486 aa16.34■□□□□ 0.21
PSMC1P9-201ENST00000396338 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
PSMC1P9-201ENST00000396338 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
PSMC1P9-201ENST00000396338 CEP164Q9UPV0 1460 aa16.29■□□□□ 0.2
PSMC1P9-201ENST00000396338 MRC2Q9UBG0 1479 aa16.24■□□□□ 0.19
PSMC1P9-201ENST00000396338 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
PSMC1P9-201ENST00000396338 KIF21AQ7Z4S6 1674 aa16.21■□□□□ 0.19
PSMC1P9-201ENST00000396338 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
PSMC1P9-201ENST00000396338 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
PSMC1P9-201ENST00000396338 WDR62O43379 1518 aa16.14■□□□□ 0.17
PSMC1P9-201ENST00000396338 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
PSMC1P9-201ENST00000396338 PRDM2Q13029 1718 aa16.07■□□□□ 0.16
PSMC1P9-201ENST00000396338 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
PSMC1P9-201ENST00000396338 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
PSMC1P9-201ENST00000396338 ATXN8OSP0DMR3 200 aa16■□□□□ 0.15
PSMC1P9-201ENST00000396338 TOPBP1Q92547 1522 aa15.99■□□□□ 0.15
PSMC1P9-201ENST00000396338 ZBTB22O15209 634 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms