RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
COL11A1-201ENST00000353414 EHMT2Q96KQ7 1210 aa16.81■□□□□ 0.28
COL11A1-201ENST00000353414 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
COL11A1-201ENST00000353414 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
COL11A1-201ENST00000353414 TTBK1Q5TCY1 1321 aaPredicted RBP16.15■□□□□ 0.18
COL11A1-201ENST00000353414 RANGAP1P46060 587 aaPredicted RBP15.92■□□□□ 0.14
COL11A1-201ENST00000353414 PELP1Q8IZL8 1130 aaKnown RBP15.79■□□□□ 0.12
COL11A1-201ENST00000353414 FAM9AQ8IZU1 332 aaPredicted RBP15.77■□□□□ 0.12
COL11A1-201ENST00000353414 APLP2Q06481 763 aa15.76■□□□□ 0.11
COL11A1-201ENST00000353414 ATP1B4Q9UN42 357 aaPredicted RBP15.73■□□□□ 0.11
COL11A1-201ENST00000353414 ERICH6Q7L0X2 663 aa15.57■□□□□ 0.08
COL11A1-201ENST00000353414 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
COL11A1-201ENST00000353414 MYT1Q01538 1121 aa15.43■□□□□ 0.06
COL11A1-201ENST00000353414 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
COL11A1-201ENST00000353414 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
COL11A1-201ENST00000353414 YTHDC1Q96MU7 727 aaKnown RBP15.29■□□□□ 0.04
COL11A1-201ENST00000353414 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.03
COL11A1-201ENST00000353414 CNGB1Q14028 1251 aaPredicted RBP15.25■□□□□ 0.03
COL11A1-201ENST00000353414 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
COL11A1-201ENST00000353414 POLR3GLQ9BT43 218 aa15.19■□□□□ 0.02
COL11A1-201ENST00000353414 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
COL11A1-201ENST00000353414 UBTFP17480 764 aaKnown RBP15.07■□□□□ 0
COL11A1-201ENST00000353414 SLC4A1APQ9BWU0 796 aaKnown RBP15.02■□□□□ -0
COL11A1-201ENST00000353414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.99□□□□□ -0.01
COL11A1-201ENST00000353414 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
COL11A1-201ENST00000353414 ITGAEP38570 1179 aa14.99□□□□□ -0.01
COL11A1-201ENST00000353414 CENPBP07199 599 aaPredicted RBP14.97□□□□□ -0.01
COL11A1-201ENST00000353414 NEFLP07196 543 aa14.97□□□□□ -0.01
COL11A1-201ENST00000353414 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
COL11A1-201ENST00000353414 DAXXQ9UER7 740 aaPredicted RBP14.83□□□□□ -0.04
COL11A1-201ENST00000353414 BCL11AQ9H165 835 aa14.76□□□□□ -0.05
COL11A1-201ENST00000353414 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
COL11A1-201ENST00000353414 CLSPNQ9HAW4 1339 aa14.58□□□□□ -0.07
COL11A1-201ENST00000353414 ZEB1P37275 1124 aaPredicted RBP14.57□□□□□ -0.08
COL11A1-201ENST00000353414 PLPPR3Q6T4P5 718 aa14.52□□□□□ -0.09
COL11A1-201ENST00000353414 ZNF316A6NFI3 1004 aaPredicted RBP14.49□□□□□ -0.09
COL11A1-201ENST00000353414 ABCC9O60706 1549 aa14.48□□□□□ -0.09
COL11A1-201ENST00000353414 BCANQ96GW7 911 aa14.44□□□□□ -0.1
COL11A1-201ENST00000353414 PABPN1Q86U42 306 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL11A1-201ENST00000353414 ZNF326Q5BKZ1 582 aaKnown RBP14.37□□□□□ -0.11
COL11A1-201ENST00000353414 FAM50AQ14320 339 aaKnown RBP14.35□□□□□ -0.11
COL11A1-201ENST00000353414 LOC105371045A0A1W2PR82 267 aa14.34□□□□□ -0.11
COL11A1-201ENST00000353414 TRIM52Q96A61 297 aa14.34□□□□□ -0.11
COL11A1-201ENST00000353414 NEUROD1Q13562 356 aa14.33□□□□□ -0.12
COL11A1-201ENST00000353414 FBLN2P98095 1184 aa14.3□□□□□ -0.12
COL11A1-201ENST00000353414 ARID3CA6NKF2 412 aa14.27□□□□□ -0.12
COL11A1-201ENST00000353414 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
COL11A1-201ENST00000353414 ZBTB47Q9UFB7 747 aaPredicted RBP14.2□□□□□ -0.14
COL11A1-201ENST00000353414 TRIM26Q12899 539 aaPredicted RBP14.18□□□□□ -0.14
COL11A1-201ENST00000353414 HRCP23327 699 aa14.18□□□□□ -0.14
COL11A1-201ENST00000353414 PLEKHG5O94827 1062 aa14.15□□□□□ -0.14
COL11A1-201ENST00000353414 CANXP27824 592 aaKnown RBP14.14□□□□□ -0.15
COL11A1-201ENST00000353414 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
COL11A1-201ENST00000353414 A0A0G2JS52 829 aa14.1□□□□□ -0.15
COL11A1-201ENST00000353414 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
COL11A1-201ENST00000353414 P3H3Q8IVL6 736 aa14.02□□□□□ -0.17
COL11A1-201ENST00000353414 NPM2Q86SE8 214 aaKnown RBP14.01□□□□□ -0.17
COL11A1-201ENST00000353414 DIEXFQ68CQ4 756 aaKnown RBP14□□□□□ -0.17
COL11A1-201ENST00000353414 CHGAP10645 457 aaKnown RBP13.97□□□□□ -0.17
COL11A1-201ENST00000353414 ZNF777Q9ULD5 760 aaPredicted RBP13.97□□□□□ -0.17
COL11A1-201ENST00000353414 NEFMP07197 916 aa13.94□□□□□ -0.18
COL11A1-201ENST00000353414 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
COL11A1-201ENST00000353414 ZBTB7CA1YPR0 619 aa13.92□□□□□ -0.18
COL11A1-201ENST00000353414 SALL2Q9Y467 1007 aaPredicted RBP13.91□□□□□ -0.18
COL11A1-201ENST00000353414 STAG3Q9UJ98 1225 aa13.91□□□□□ -0.18
COL11A1-201ENST00000353414 ARXQ96QS3 562 aa13.9□□□□□ -0.18
COL11A1-201ENST00000353414 ESF1Q9H501 851 aaKnown RBP13.9□□□□□ -0.18
COL11A1-201ENST00000353414 ANP32CO43423 234 aa13.88□□□□□ -0.19
COL11A1-201ENST00000353414 TULP1O00294 542 aaPredicted RBP13.87□□□□□ -0.19
COL11A1-201ENST00000353414 CDK11AQ9UQ88 783 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-201ENST00000353414 HSP90AA1P07900 732 aaKnown RBP13.79□□□□□ -0.2
COL11A1-201ENST00000353414 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
COL11A1-201ENST00000353414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.21
COL11A1-201ENST00000353414 C14orf37Q86TY3 774 aa13.73□□□□□ -0.21
COL11A1-201ENST00000353414 TPRNQ4KMQ1 711 aa13.71□□□□□ -0.22
COL11A1-201ENST00000353414 TAOK2Q9UL54 1235 aa13.7□□□□□ -0.22
COL11A1-201ENST00000353414 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
COL11A1-201ENST00000353414 SENP3-EIF4A1A0A087X0R7 540 aa13.67□□□□□ -0.22
COL11A1-201ENST00000353414 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.23
COL11A1-201ENST00000353414 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
COL11A1-201ENST00000353414 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
COL11A1-201ENST00000353414 NBR1Q14596 966 aa13.62□□□□□ -0.23
COL11A1-201ENST00000353414 ANP32BQ92688 251 aaKnown RBP13.6□□□□□ -0.23
COL11A1-201ENST00000353414 KDM2AQ9Y2K7 1162 aa13.6□□□□□ -0.23
COL11A1-201ENST00000353414 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL11A1-201ENST00000353414 CHIC2Q9UKJ5 165 aa13.56□□□□□ -0.24
COL11A1-201ENST00000353414 CDK11BP21127 795 aaKnown RBP13.56□□□□□ -0.24
COL11A1-201ENST00000353414 HAP1P54257 671 aaPredicted RBP13.55□□□□□ -0.24
COL11A1-201ENST00000353414 FKBP8Q14318 412 aa13.54□□□□□ -0.24
COL11A1-201ENST00000353414 IRX6P78412 446 aaPredicted RBP13.54□□□□□ -0.24
COL11A1-201ENST00000353414 HIRIP3Q9BW71 556 aaPredicted RBP13.5□□□□□ -0.25
COL11A1-201ENST00000353414 HNRNPUQ00839 825 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL11A1-201ENST00000353414 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
COL11A1-201ENST00000353414 UPF2Q9HAU5 1272 aaKnown RBP13.48□□□□□ -0.25
COL11A1-201ENST00000353414 GLIPR1L2Q4G1C9 344 aa13.47□□□□□ -0.25
COL11A1-201ENST00000353414 ARID4BQ4LE39 1312 aaPredicted RBP13.46□□□□□ -0.26
COL11A1-201ENST00000353414 NPHP1O15259 732 aa13.46□□□□□ -0.26
COL11A1-201ENST00000353414 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
COL11A1-201ENST00000353414 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
COL11A1-201ENST00000353414 PPM1GO15355 546 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms