RNA–Protein interactions for RNA: ENST00000399722.6

RBBP8-204, Transcript of RB binding protein 8, endonuclease, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBBP8, Length 3,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP8-204ENST00000399722 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
RBBP8-204ENST00000399722 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
RBBP8-204ENST00000399722 SHROOM4Q9ULL8 1493 aa18.88■□□□□ 0.61
RBBP8-204ENST00000399722 CCDC180Q9P1Z9 1646 aa18.45■□□□□ 0.54
RBBP8-204ENST00000399722 SUPT5HO00267 1087 aaKnown RBP18.38■□□□□ 0.53
RBBP8-204ENST00000399722 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
RBBP8-204ENST00000399722 ABCC9O60706 1549 aa17.99■□□□□ 0.47
RBBP8-204ENST00000399722 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
RBBP8-204ENST00000399722 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
RBBP8-204ENST00000399722 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
RBBP8-204ENST00000399722 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
RBBP8-204ENST00000399722 NACADO15069 1562 aa17.28■□□□□ 0.36
RBBP8-204ENST00000399722 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
RBBP8-204ENST00000399722 MYO15BQ96JP2 1530 aa17.2■□□□□ 0.34
RBBP8-204ENST00000399722 RSF1Q96T23 1441 aaPredicted RBP17.2■□□□□ 0.34
RBBP8-204ENST00000399722 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
RBBP8-204ENST00000399722 RB1CC1Q8TDY2 1594 aa17.16■□□□□ 0.34
RBBP8-204ENST00000399722 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
RBBP8-204ENST00000399722 LOC105371045A0A1W2PR82 267 aa17.09■□□□□ 0.33
RBBP8-204ENST00000399722 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.32
RBBP8-204ENST00000399722 TRIM41Q8WV44 630 aa17■□□□□ 0.31
RBBP8-204ENST00000399722 WIZO95785 1651 aa16.91■□□□□ 0.3
RBBP8-204ENST00000399722 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
RBBP8-204ENST00000399722 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
RBBP8-204ENST00000399722 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.26
RBBP8-204ENST00000399722 BICRAQ9NZM4 1560 aa16.67■□□□□ 0.26
RBBP8-204ENST00000399722 SMARCA4P51532 1647 aa16.64■□□□□ 0.26
RBBP8-204ENST00000399722 CCDC88BA6NC98 1476 aa16.58■□□□□ 0.24
RBBP8-204ENST00000399722 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
RBBP8-204ENST00000399722 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
RBBP8-204ENST00000399722 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
RBBP8-204ENST00000399722 TTBK1Q5TCY1 1321 aaPredicted RBP16.46■□□□□ 0.23
RBBP8-204ENST00000399722 SMARCA2P51531 1590 aa16.43■□□□□ 0.22
RBBP8-204ENST00000399722 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
RBBP8-204ENST00000399722 BAZ1BQ9UIG0 1483 aaKnown RBP16.4■□□□□ 0.22
RBBP8-204ENST00000399722 ATAD2BQ9ULI0 1458 aa16.4■□□□□ 0.22
RBBP8-204ENST00000399722 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
RBBP8-204ENST00000399722 SOGA1O94964 1423 aa16.31■□□□□ 0.2
RBBP8-204ENST00000399722 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
RBBP8-204ENST00000399722 TRIM26Q12899 539 aaPredicted RBP16.23■□□□□ 0.19
RBBP8-204ENST00000399722 EIF4G1Q04637 1599 aaKnown RBP16.23■□□□□ 0.19
RBBP8-204ENST00000399722 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
RBBP8-204ENST00000399722 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
RBBP8-204ENST00000399722 HRCP23327 699 aa16.17■□□□□ 0.18
RBBP8-204ENST00000399722 PEG3Q9GZU2 1588 aa16.15■□□□□ 0.18
RBBP8-204ENST00000399722 NCAPD3P42695 1498 aa16.07■□□□□ 0.16
RBBP8-204ENST00000399722 SYNJ1O43426 1573 aa16.06■□□□□ 0.16
RBBP8-204ENST00000399722 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
RBBP8-204ENST00000399722 CEP162Q5TB80 1403 aa15.99■□□□□ 0.15
RBBP8-204ENST00000399722 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
RBBP8-204ENST00000399722 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
RBBP8-204ENST00000399722 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
RBBP8-204ENST00000399722 TNIKQ9UKE5 1360 aa15.9■□□□□ 0.14
RBBP8-204ENST00000399722 GOLGA3Q08378 1498 aa15.89■□□□□ 0.13
RBBP8-204ENST00000399722 EEA1Q15075 1411 aa15.88■□□□□ 0.13
RBBP8-204ENST00000399722 RAPGEF2Q9Y4G8 1499 aa15.87■□□□□ 0.13
RBBP8-204ENST00000399722 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
RBBP8-204ENST00000399722 APLP2Q06481 763 aa15.86■□□□□ 0.13
RBBP8-204ENST00000399722 CFTRP13569 1480 aa15.86■□□□□ 0.13
RBBP8-204ENST00000399722 NESP48681 1621 aa15.85■□□□□ 0.13
RBBP8-204ENST00000399722 CUX1P39880 1505 aa15.84■□□□□ 0.13
RBBP8-204ENST00000399722 CEP164Q9UPV0 1460 aa15.82■□□□□ 0.12
RBBP8-204ENST00000399722 CCER1Q8TC90 406 aaPredicted RBP15.81■□□□□ 0.12
RBBP8-204ENST00000399722 CLIP1P30622 1438 aa15.81■□□□□ 0.12
RBBP8-204ENST00000399722 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
RBBP8-204ENST00000399722 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
RBBP8-204ENST00000399722 ATP1B4Q9UN42 357 aaPredicted RBP15.79■□□□□ 0.12
RBBP8-204ENST00000399722 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
RBBP8-204ENST00000399722 CUX2O14529 1486 aa15.75■□□□□ 0.11
RBBP8-204ENST00000399722 KIF27Q86VH2 1401 aa15.75■□□□□ 0.11
RBBP8-204ENST00000399722 FANCD2Q9BXW9 1451 aa15.73■□□□□ 0.11
RBBP8-204ENST00000399722 FGD5Q6ZNL6 1462 aa15.68■□□□□ 0.1
RBBP8-204ENST00000399722 RAD54L2Q9Y4B4 1467 aa15.68■□□□□ 0.1
RBBP8-204ENST00000399722 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
RBBP8-204ENST00000399722 ITGAEP38570 1179 aa15.65■□□□□ 0.1
RBBP8-204ENST00000399722 KIF21BO75037 1637 aa15.63■□□□□ 0.09
RBBP8-204ENST00000399722 IGF1RP08069 1367 aa15.63■□□□□ 0.09
RBBP8-204ENST00000399722 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
RBBP8-204ENST00000399722 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
RBBP8-204ENST00000399722 KANK4Q5T7N3 995 aaPredicted RBP15.61■□□□□ 0.09
RBBP8-204ENST00000399722 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
RBBP8-204ENST00000399722 PRXQ9BXM0 1461 aa15.59■□□□□ 0.09
RBBP8-204ENST00000399722 VPS8Q8N3P4 1428 aa15.58■□□□□ 0.08
RBBP8-204ENST00000399722 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
RBBP8-204ENST00000399722 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
RBBP8-204ENST00000399722 ARAP1Q96P48 1450 aa15.51■□□□□ 0.07
RBBP8-204ENST00000399722 ARID3CA6NKF2 412 aa15.51■□□□□ 0.07
RBBP8-204ENST00000399722 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
RBBP8-204ENST00000399722 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
RBBP8-204ENST00000399722 ERICH3Q5RHP9 1530 aa15.45■□□□□ 0.06
RBBP8-204ENST00000399722 PRDM2Q13029 1718 aa15.45■□□□□ 0.06
RBBP8-204ENST00000399722 FBLN2P98095 1184 aa15.44■□□□□ 0.06
RBBP8-204ENST00000399722 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
RBBP8-204ENST00000399722 ARHGAP35Q9NRY4 1499 aa15.43■□□□□ 0.06
RBBP8-204ENST00000399722 FAM50AQ14320 339 aaKnown RBP15.41■□□□□ 0.06
RBBP8-204ENST00000399722 LAMC3Q9Y6N6 1575 aa15.4■□□□□ 0.06
RBBP8-204ENST00000399722 FHOD3Q2V2M9 1422 aa15.39■□□□□ 0.05
RBBP8-204ENST00000399722 AQRO60306 1485 aaKnown RBP eCLIP15.39■□□□□ 0.054e-6■■■■■ 31
RBBP8-204ENST00000399722 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
RBBP8-204ENST00000399722 ABCA10Q8WWZ4 1543 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms