RNA–Protein interactions for RNA: ENST00000427331.5

CNTN4-205, Transcript of contactin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNTN4, Length 4,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-205ENST00000427331 NISCHQ9Y2I1 1504 aa17.81■□□□□ 0.44
CNTN4-205ENST00000427331 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
CNTN4-205ENST00000427331 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
CNTN4-205ENST00000427331 SHROOM4Q9ULL8 1493 aa16.58■□□□□ 0.24
CNTN4-205ENST00000427331 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
CNTN4-205ENST00000427331 APLP2Q06481 763 aa15.88■□□□□ 0.13
CNTN4-205ENST00000427331 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
CNTN4-205ENST00000427331 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
CNTN4-205ENST00000427331 PCGF6Q9BYE7 350 aa15.45■□□□□ 0.06
CNTN4-205ENST00000427331 PELP1Q8IZL8 1130 aaKnown RBP15.44■□□□□ 0.06
CNTN4-205ENST00000427331 ZEB1P37275 1124 aaPredicted RBP15.39■□□□□ 0.05
CNTN4-205ENST00000427331 UBTFP17480 764 aaKnown RBP15.38■□□□□ 0.05
CNTN4-205ENST00000427331 TTBK1Q5TCY1 1321 aaPredicted RBP15.36■□□□□ 0.05
CNTN4-205ENST00000427331 RANGAP1P46060 587 aaPredicted RBP15.33■□□□□ 0.04
CNTN4-205ENST00000427331 ATP1B4Q9UN42 357 aaPredicted RBP15.25■□□□□ 0.03
CNTN4-205ENST00000427331 CCER1Q8TC90 406 aaPredicted RBP15.23■□□□□ 0.03
CNTN4-205ENST00000427331 ABCC9O60706 1549 aa15.13■□□□□ 0.01
CNTN4-205ENST00000427331 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
CNTN4-205ENST00000427331 CENPBP07199 599 aaPredicted RBP15.06■□□□□ 0
CNTN4-205ENST00000427331 TRIM26Q12899 539 aaPredicted RBP15.05■□□□□ -0
CNTN4-205ENST00000427331 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
CNTN4-205ENST00000427331 PPARGC1BQ86YN6 1023 aaKnown RBP14.88□□□□□ -0.03
CNTN4-205ENST00000427331 LOC105371045A0A1W2PR82 267 aa14.88□□□□□ -0.03
CNTN4-205ENST00000427331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
CNTN4-205ENST00000427331 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
CNTN4-205ENST00000427331 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
CNTN4-205ENST00000427331 ZCCHC6Q5VYS8 1495 aaKnown RBP14.78□□□□□ -0.04
CNTN4-205ENST00000427331 HRCP23327 699 aa14.74□□□□□ -0.05
CNTN4-205ENST00000427331 ITGAEP38570 1179 aa14.72□□□□□ -0.05
CNTN4-205ENST00000427331 NEFLP07196 543 aa14.72□□□□□ -0.05
CNTN4-205ENST00000427331 MYT1LQ9UL68 1186 aa14.65□□□□□ -0.06
CNTN4-205ENST00000427331 ERICH6Q7L0X2 663 aa14.62□□□□□ -0.07
CNTN4-205ENST00000427331 YTHDC1Q96MU7 727 aaKnown RBP14.61□□□□□ -0.07
CNTN4-205ENST00000427331 SCRIBQ14160 1630 aa14.6□□□□□ -0.07
CNTN4-205ENST00000427331 FAM50AQ14320 339 aaKnown RBP14.49□□□□□ -0.09
CNTN4-205ENST00000427331 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
CNTN4-205ENST00000427331 POLR3GLQ9BT43 218 aa14.44□□□□□ -0.1
CNTN4-205ENST00000427331 RB1CC1Q8TDY2 1594 aa14.42□□□□□ -0.1
CNTN4-205ENST00000427331 TRIM52Q96A61 297 aa14.37□□□□□ -0.11
CNTN4-205ENST00000427331 FBLN2P98095 1184 aa14.35□□□□□ -0.11
CNTN4-205ENST00000427331 NACADO15069 1562 aa14.34□□□□□ -0.11
CNTN4-205ENST00000427331 DIEXFQ68CQ4 756 aaKnown RBP14.33□□□□□ -0.12
CNTN4-205ENST00000427331 CDK11AQ9UQ88 783 aaPredicted RBP14.26□□□□□ -0.13
CNTN4-205ENST00000427331 NEUROD1Q13562 356 aa14.25□□□□□ -0.13
CNTN4-205ENST00000427331 DCAF1Q9Y4B6 1507 aa14.22□□□□□ -0.13
CNTN4-205ENST00000427331 P3H3Q8IVL6 736 aa14.22□□□□□ -0.13
CNTN4-205ENST00000427331 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
CNTN4-205ENST00000427331 MYT1Q01538 1121 aa14.19□□□□□ -0.14
CNTN4-205ENST00000427331 CNGB1Q14028 1251 aaPredicted RBP14.19□□□□□ -0.14
CNTN4-205ENST00000427331 DAXXQ9UER7 740 aaPredicted RBP14.18□□□□□ -0.14
CNTN4-205ENST00000427331 RSF1Q96T23 1441 aaPredicted RBP14.17□□□□□ -0.14
CNTN4-205ENST00000427331 ANP32CO43423 234 aa14.13□□□□□ -0.15
CNTN4-205ENST00000427331 ZNF316A6NFI3 1004 aaPredicted RBP14.12□□□□□ -0.15
CNTN4-205ENST00000427331 EEA1Q15075 1411 aa14.12□□□□□ -0.15
CNTN4-205ENST00000427331 ZNF326Q5BKZ1 582 aaKnown RBP14.1□□□□□ -0.15
CNTN4-205ENST00000427331 ARID3CA6NKF2 412 aa14.07□□□□□ -0.16
CNTN4-205ENST00000427331 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
CNTN4-205ENST00000427331 ZNF777Q9ULD5 760 aaPredicted RBP14.06□□□□□ -0.16
CNTN4-205ENST00000427331 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
CNTN4-205ENST00000427331 CLIP1P30622 1438 aa13.99□□□□□ -0.17
CNTN4-205ENST00000427331 WRNQ14191 1432 aaPredicted RBP eCLIP13.99□□□□□ -0.17
CNTN4-205ENST00000427331 GOLGA3Q08378 1498 aa13.98□□□□□ -0.17
CNTN4-205ENST00000427331 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
CNTN4-205ENST00000427331 TONSLQ96HA7 1378 aa13.97□□□□□ -0.17
CNTN4-205ENST00000427331 CLSPNQ9HAW4 1339 aa13.95□□□□□ -0.18
CNTN4-205ENST00000427331 CHMP7Q8WUX9 453 aaPredicted RBP13.94□□□□□ -0.18
CNTN4-205ENST00000427331 MTUS2Q5JR59 1369 aa13.94□□□□□ -0.18
CNTN4-205ENST00000427331 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
CNTN4-205ENST00000427331 ACIN1Q9UKV3 1341 aaKnown RBP13.88□□□□□ -0.19
CNTN4-205ENST00000427331 CEP164Q9UPV0 1460 aa13.88□□□□□ -0.19
CNTN4-205ENST00000427331 ESF1Q9H501 851 aaKnown RBP13.88□□□□□ -0.19
CNTN4-205ENST00000427331 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
CNTN4-205ENST00000427331 NEFMP07197 916 aa13.88□□□□□ -0.19
CNTN4-205ENST00000427331 TSPY4P0CV99 314 aa13.87□□□□□ -0.19
CNTN4-205ENST00000427331 TSPY10P0CW01 314 aa13.87□□□□□ -0.19
CNTN4-205ENST00000427331 TNIKQ9UKE5 1360 aa13.86□□□□□ -0.19
CNTN4-205ENST00000427331 BCANQ96GW7 911 aa13.86□□□□□ -0.19
CNTN4-205ENST00000427331 MYO15BQ96JP2 1530 aa13.85□□□□□ -0.19
CNTN4-205ENST00000427331 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
CNTN4-205ENST00000427331 GTF3C3Q9Y5Q9 886 aa13.84□□□□□ -0.19
CNTN4-205ENST00000427331 CHIC2Q9UKJ5 165 aa13.81□□□□□ -0.2
CNTN4-205ENST00000427331 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
CNTN4-205ENST00000427331 RTL5Q5HYW3 569 aaPredicted RBP13.8□□□□□ -0.2
CNTN4-205ENST00000427331 CANXP27824 592 aaKnown RBP13.78□□□□□ -0.2
CNTN4-205ENST00000427331 STAG3Q9UJ98 1225 aa13.78□□□□□ -0.2
CNTN4-205ENST00000427331 PLEKHD1A6NEE1 506 aa13.76□□□□□ -0.21
CNTN4-205ENST00000427331 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
CNTN4-205ENST00000427331 CHGAP10645 457 aaKnown RBP13.75□□□□□ -0.21
CNTN4-205ENST00000427331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.21
CNTN4-205ENST00000427331 MROH2BQ7Z745 1585 aa13.72□□□□□ -0.21
CNTN4-205ENST00000427331 ERCC6Q03468 1493 aa13.71□□□□□ -0.21
CNTN4-205ENST00000427331 DDX10Q13206 875 aaKnown RBP13.7□□□□□ -0.22
CNTN4-205ENST00000427331 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
CNTN4-205ENST00000427331 CCDC88BA6NC98 1476 aa13.68□□□□□ -0.22
CNTN4-205ENST00000427331 RRP7BPQ9NSQ0 103 aa13.65□□□□□ -0.22
CNTN4-205ENST00000427331 CARMIL1Q5VZK9 1371 aa13.65□□□□□ -0.22
CNTN4-205ENST00000427331 CUX2O14529 1486 aa13.64□□□□□ -0.23
CNTN4-205ENST00000427331 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
CNTN4-205ENST00000427331 CFDP1Q9UEE9 299 aaPredicted RBP13.64□□□□□ -0.23
CNTN4-205ENST00000427331 EIF4G2P78344 907 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms