RNA–Protein interactions for RNA: ENST00000371260.8

SPO11-202, Transcript of SPO11, initiator of meiotic double stranded breaks, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPO11, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPO11-202ENST00000371260 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
SPO11-202ENST00000371260 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
SPO11-202ENST00000371260 NISCHQ9Y2I1 1504 aa20.77■□□□□ 0.92
SPO11-202ENST00000371260 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
SPO11-202ENST00000371260 POTEDQ86YR6 584 aa19.82■□□□□ 0.76
SPO11-202ENST00000371260 PHF23Q9BUL5 403 aaPredicted RBP19.6■□□□□ 0.73
SPO11-202ENST00000371260 FOXD1Q16676 465 aa18.8■□□□□ 0.6
SPO11-202ENST00000371260 MSH5O43196 834 aa18.23■□□□□ 0.51
SPO11-202ENST00000371260 CCDC180Q9P1Z9 1646 aa17.78■□□□□ 0.44
SPO11-202ENST00000371260 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
SPO11-202ENST00000371260 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
SPO11-202ENST00000371260 PIAS4Q8N2W9 510 aaPredicted RBP17.3■□□□□ 0.36
SPO11-202ENST00000371260 DCAF1Q9Y4B6 1507 aa17.25■□□□□ 0.35
SPO11-202ENST00000371260 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
SPO11-202ENST00000371260 PLPPR3Q6T4P5 718 aa17.13■□□□□ 0.33
SPO11-202ENST00000371260 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
SPO11-202ENST00000371260 ADRA2BP18089 450 aa16.85■□□□□ 0.29
SPO11-202ENST00000371260 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
SPO11-202ENST00000371260 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
SPO11-202ENST00000371260 ABCC9O60706 1549 aa16.62■□□□□ 0.25
SPO11-202ENST00000371260 HRCP23327 699 aa16.52■□□□□ 0.23
SPO11-202ENST00000371260 NACADO15069 1562 aa16.39■□□□□ 0.21
SPO11-202ENST00000371260 RSF1Q96T23 1441 aaPredicted RBP16.39■□□□□ 0.21
SPO11-202ENST00000371260 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
SPO11-202ENST00000371260 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
SPO11-202ENST00000371260 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
SPO11-202ENST00000371260 PCGF6Q9BYE7 350 aa16.29■□□□□ 0.2
SPO11-202ENST00000371260 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
SPO11-202ENST00000371260 LOC105371045A0A1W2PR82 267 aa16.17■□□□□ 0.18
SPO11-202ENST00000371260 TRIM41Q8WV44 630 aa16.12■□□□□ 0.17
SPO11-202ENST00000371260 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
SPO11-202ENST00000371260 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
SPO11-202ENST00000371260 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
SPO11-202ENST00000371260 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
SPO11-202ENST00000371260 WIZO95785 1651 aa15.92■□□□□ 0.14
SPO11-202ENST00000371260 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
SPO11-202ENST00000371260 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
SPO11-202ENST00000371260 PPARGC1BQ86YN6 1023 aaKnown RBP15.84■□□□□ 0.13
SPO11-202ENST00000371260 SMARCA4P51532 1647 aa15.78■□□□□ 0.12
SPO11-202ENST00000371260 FAM9AQ8IZU1 332 aaPredicted RBP15.76■□□□□ 0.11
SPO11-202ENST00000371260 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
SPO11-202ENST00000371260 EEA1Q15075 1411 aa15.71■□□□□ 0.11
SPO11-202ENST00000371260 SMARCA2P51531 1590 aa15.69■□□□□ 0.1
SPO11-202ENST00000371260 CCDC88BA6NC98 1476 aa15.67■□□□□ 0.1
SPO11-202ENST00000371260 UNC13AQ9UPW8 1703 aa15.66■□□□□ 0.1
SPO11-202ENST00000371260 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
SPO11-202ENST00000371260 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
SPO11-202ENST00000371260 TNIKQ9UKE5 1360 aa15.57■□□□□ 0.08
SPO11-202ENST00000371260 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
SPO11-202ENST00000371260 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
SPO11-202ENST00000371260 CEP162Q5TB80 1403 aa15.49■□□□□ 0.07
SPO11-202ENST00000371260 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
SPO11-202ENST00000371260 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
SPO11-202ENST00000371260 CSRNP3Q8WYN3 585 aa15.46■□□□□ 0.07
SPO11-202ENST00000371260 GOLGA3Q08378 1498 aa15.46■□□□□ 0.06
SPO11-202ENST00000371260 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
SPO11-202ENST00000371260 SOGA1O94964 1423 aa15.42■□□□□ 0.06
SPO11-202ENST00000371260 KIF21BO75037 1637 aa15.39■□□□□ 0.05
SPO11-202ENST00000371260 CCER1Q8TC90 406 aaPredicted RBP15.39■□□□□ 0.05
SPO11-202ENST00000371260 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
SPO11-202ENST00000371260 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
SPO11-202ENST00000371260 ATAD2BQ9ULI0 1458 aa15.35■□□□□ 0.05
SPO11-202ENST00000371260 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
SPO11-202ENST00000371260 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
SPO11-202ENST00000371260 POTEHQ6S545 545 aa15.31■□□□□ 0.04
SPO11-202ENST00000371260 UBTFP17480 764 aaKnown RBP15.3■□□□□ 0.04
SPO11-202ENST00000371260 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
SPO11-202ENST00000371260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
SPO11-202ENST00000371260 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
SPO11-202ENST00000371260 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
SPO11-202ENST00000371260 TOP2BQ02880 1626 aa15.21■□□□□ 0.03
SPO11-202ENST00000371260 CLIP1P30622 1438 aa15.21■□□□□ 0.02
SPO11-202ENST00000371260 VPS8Q8N3P4 1428 aa15.21■□□□□ 0.02
SPO11-202ENST00000371260 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
SPO11-202ENST00000371260 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
SPO11-202ENST00000371260 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
SPO11-202ENST00000371260 DIEXFQ68CQ4 756 aaKnown RBP15.15■□□□□ 0.02
SPO11-202ENST00000371260 CENPBP07199 599 aaPredicted RBP15.13■□□□□ 0.01
SPO11-202ENST00000371260 C1QBPQ07021 282 aaKnown RBP15.13■□□□□ 0.01
SPO11-202ENST00000371260 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
SPO11-202ENST00000371260 APLP2Q06481 763 aa15.11■□□□□ 0.01
SPO11-202ENST00000371260 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
SPO11-202ENST00000371260 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
SPO11-202ENST00000371260 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
SPO11-202ENST00000371260 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
SPO11-202ENST00000371260 PRXQ9BXM0 1461 aa15.07■□□□□ 0
SPO11-202ENST00000371260 CLSPNQ9HAW4 1339 aa15.07■□□□□ 0
SPO11-202ENST00000371260 TTBK1Q5TCY1 1321 aaPredicted RBP15□□□□□ -0.01
SPO11-202ENST00000371260 KIF27Q86VH2 1401 aa15□□□□□ -0.01
SPO11-202ENST00000371260 CFTRP13569 1480 aa14.98□□□□□ -0.01
SPO11-202ENST00000371260 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
SPO11-202ENST00000371260 CUX1P39880 1505 aa14.94□□□□□ -0.02
SPO11-202ENST00000371260 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
SPO11-202ENST00000371260 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
SPO11-202ENST00000371260 PRDM2Q13029 1718 aa14.93□□□□□ -0.02
SPO11-202ENST00000371260 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
SPO11-202ENST00000371260 RRBP1Q9P2E9 1410 aaKnown RBP14.89□□□□□ -0.03
SPO11-202ENST00000371260 MAP3K1Q13233 1512 aa14.88□□□□□ -0.03
SPO11-202ENST00000371260 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
SPO11-202ENST00000371260 CUX2O14529 1486 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms