Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA3PQ9Y6N3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 AC090192.1-201ENST00000517740 490 ntBASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA3PQ9Y6N3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA3PQ9Y6N3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA3PQ9Y6N3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 AC026310.3-201ENST00000625186 2373 ntBASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 CNN2P6-201ENST00000439038 900 ntBASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCA3PQ9Y6N3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 AC007322.4-201ENST00000509611 723 ntBASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 AL591742.1-201ENST00000604433 565 ntBASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 RAP2CP1-201ENST00000605103 478 ntBASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCA3PQ9Y6N3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms