Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM17Q9Y577 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.52■■□□□ 1.36
TRIM17Q9Y577 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM17Q9Y577 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM17Q9Y577 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM17Q9Y577 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM17Q9Y577 NTF6B-201ENST00000591913 560 ntBASIC23.52■■□□□ 1.36
TRIM17Q9Y577 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
TRIM17Q9Y577 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM17Q9Y577 KRT8P9-201ENST00000558927 1449 ntBASIC23.51■■□□□ 1.35
TRIM17Q9Y577 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM17Q9Y577 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 AF186192.3-201ENST00000583427 947 ntBASIC23.5■■□□□ 1.35
TRIM17Q9Y577 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM17Q9Y577 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 AC087388.1-201ENST00000571370 1112 ntBASIC23.49■■□□□ 1.35
TRIM17Q9Y577 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.49■■□□□ 1.35
TRIM17Q9Y577 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRIM17Q9Y577 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 FAM197Y1-201ENST00000421178 764 ntBASIC23.48■■□□□ 1.35
TRIM17Q9Y577 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 HTR7P1-201ENST00000538670 1336 ntBASIC23.48■■□□□ 1.35
TRIM17Q9Y577 LINC01568-207ENST00000641790 1380 ntBASIC23.48■■□□□ 1.35
TRIM17Q9Y577 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
TRIM17Q9Y577 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.47■■□□□ 1.35
TRIM17Q9Y577 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.47■■□□□ 1.35
TRIM17Q9Y577 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.47■■□□□ 1.35
TRIM17Q9Y577 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM17Q9Y577 AL137013.1-201ENST00000432946 1228 ntBASIC23.47■■□□□ 1.35
TRIM17Q9Y577 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
TRIM17Q9Y577 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TRIM17Q9Y577 C11orf96-202ENST00000528572 1834 ntBASIC23.47■■□□□ 1.35
TRIM17Q9Y577 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRIM17Q9Y577 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.47■■□□□ 1.35
TRIM17Q9Y577 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRIM17Q9Y577 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms