Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 MTDHP1-201ENST00000605323 784 ntBASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CDK11AQ9UQ88 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CDK11AQ9UQ88 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC32.04■■■□□ 2.72
CDK11AQ9UQ88 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
CDK11AQ9UQ88 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC32.04■■■□□ 2.72
CDK11AQ9UQ88 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
CDK11AQ9UQ88 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CDK11AQ9UQ88 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CDK11AQ9UQ88 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC32.04■■■□□ 2.72
CDK11AQ9UQ88 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
CDK11AQ9UQ88 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 MDFI-202ENST00000373050 809 ntTSL 2 BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 AC133681.1-201ENST00000465482 601 ntBASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
CDK11AQ9UQ88 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 AC233702.5-201ENST00000584107 538 ntBASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 BRWD1-AS2-201ENST00000603064 1028 ntBASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC32.02■■■□□ 2.72
CDK11AQ9UQ88 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.72
CDK11AQ9UQ88 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
CDK11AQ9UQ88 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CDK11AQ9UQ88 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
CDK11AQ9UQ88 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CDK11AQ9UQ88 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CDK11AQ9UQ88 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CDK11AQ9UQ88 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC32■■■□□ 2.71
CDK11AQ9UQ88 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CDK11AQ9UQ88 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CDK11AQ9UQ88 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC32■■■□□ 2.71
CDK11AQ9UQ88 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CDK11AQ9UQ88 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
CDK11AQ9UQ88 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC32■■■□□ 2.71
CDK11AQ9UQ88 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
CDK11AQ9UQ88 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC32■■■□□ 2.71
CDK11AQ9UQ88 ABHD17AP6-201ENST00000458502 1044 ntBASIC32■■■□□ 2.71
CDK11AQ9UQ88 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC32■■■□□ 2.71
CDK11AQ9UQ88 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC32■■■□□ 2.71
CDK11AQ9UQ88 AC005829.2-201ENST00000571422 1056 ntBASIC32■■■□□ 2.71
CDK11AQ9UQ88 AC120498.8-201ENST00000614275 531 ntBASIC32■■■□□ 2.71
CDK11AQ9UQ88 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC32■■■□□ 2.71
CDK11AQ9UQ88 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 AC124016.1-201ENST00000609552 612 ntBASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CDK11AQ9UQ88 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 RPS2P55-201ENST00000397318 883 ntBASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 SERF2-207ENST00000409614 582 ntTSL 2 BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 SERP1-205ENST00000487153 657 ntTSL 4 BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 AC107956.1-201ENST00000494359 873 ntBASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC31.98■■■□□ 2.71
CDK11AQ9UQ88 LY6E-205ENST00000519611 635 ntTSL 3 BASIC31.98■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms