Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NOTCH3Q9UM47 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.85■□□□□ 0.13
NOTCH3Q9UM47 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 AC061975.6-201ENST00000579045 1553 ntBASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 UBE2SP1-201ENST00000450587 669 ntBASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 AC010542.4-201ENST00000563151 1910 ntBASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NOTCH3Q9UM47 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.83■□□□□ 0.13
NOTCH3Q9UM47 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
NOTCH3Q9UM47 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
NOTCH3Q9UM47 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NOTCH3Q9UM47 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
NOTCH3Q9UM47 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NOTCH3Q9UM47 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
NOTCH3Q9UM47 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NOTCH3Q9UM47 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NOTCH3Q9UM47 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms