Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 AC011767.1-201ENST00000617410 1153 ntBASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 AC007322.3-201ENST00000426526 701 ntBASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 AL591742.1-201ENST00000604433 565 ntBASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBQLN4Q9NRR5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 AC007322.4-201ENST00000509611 723 ntBASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
UBQLN4Q9NRR5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 DUX4L16-201ENST00000555130 1264 ntBASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 AL162412.1-201ENST00000567129 965 ntBASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBQLN4Q9NRR5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBQLN4Q9NRR5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms