Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.6■□□□□ 0.41
GCM1Q9NP62 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCM1Q9NP62 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.6■□□□□ 0.41
GCM1Q9NP62 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GCM1Q9NP62 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GCM1Q9NP62 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCM1Q9NP62 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCM1Q9NP62 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GCM1Q9NP62 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 AC007322.1-201ENST00000426983 750 ntBASIC17.59■□□□□ 0.41
GCM1Q9NP62 CNN2P6-201ENST00000439038 900 ntBASIC17.59■□□□□ 0.41
GCM1Q9NP62 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GCM1Q9NP62 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCM1Q9NP62 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.59■□□□□ 0.41
GCM1Q9NP62 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GCM1Q9NP62 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
GCM1Q9NP62 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GCM1Q9NP62 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GCM1Q9NP62 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GCM1Q9NP62 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
GCM1Q9NP62 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GCM1Q9NP62 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.58■□□□□ 0.41
GCM1Q9NP62 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GCM1Q9NP62 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
GCM1Q9NP62 AC007322.4-201ENST00000509611 723 ntBASIC17.58■□□□□ 0.4
GCM1Q9NP62 AC090192.1-201ENST00000517740 490 ntBASIC17.58■□□□□ 0.4
GCM1Q9NP62 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.58■□□□□ 0.4
GCM1Q9NP62 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.58■□□□□ 0.4
GCM1Q9NP62 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
GCM1Q9NP62 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.58■□□□□ 0.4
GCM1Q9NP62 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
GCM1Q9NP62 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
GCM1Q9NP62 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GCM1Q9NP62 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
GCM1Q9NP62 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GCM1Q9NP62 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
GCM1Q9NP62 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GCM1Q9NP62 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.57■□□□□ 0.4
GCM1Q9NP62 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.57■□□□□ 0.4
GCM1Q9NP62 AL024507.2-201ENST00000606070 2574 ntBASIC17.57■□□□□ 0.4
GCM1Q9NP62 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GCM1Q9NP62 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GCM1Q9NP62 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GCM1Q9NP62 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GCM1Q9NP62 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
GCM1Q9NP62 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GCM1Q9NP62 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.57■□□□□ 0.4
GCM1Q9NP62 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.57■□□□□ 0.4
GCM1Q9NP62 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.57■□□□□ 0.4
GCM1Q9NP62 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
GCM1Q9NP62 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
GCM1Q9NP62 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GCM1Q9NP62 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GCM1Q9NP62 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.57■□□□□ 0.4
GCM1Q9NP62 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GCM1Q9NP62 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
GCM1Q9NP62 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.56■□□□□ 0.4
GCM1Q9NP62 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.56■□□□□ 0.4
GCM1Q9NP62 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GCM1Q9NP62 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.56■□□□□ 0.4
GCM1Q9NP62 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.56■□□□□ 0.4
GCM1Q9NP62 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GCM1Q9NP62 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GCM1Q9NP62 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GCM1Q9NP62 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.56■□□□□ 0.4
GCM1Q9NP62 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GCM1Q9NP62 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GCM1Q9NP62 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GCM1Q9NP62 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GCM1Q9NP62 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GCM1Q9NP62 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GCM1Q9NP62 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GCM1Q9NP62 AC026310.3-201ENST00000625186 2373 ntBASIC17.55■□□□□ 0.4
GCM1Q9NP62 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GCM1Q9NP62 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GCM1Q9NP62 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
GCM1Q9NP62 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GCM1Q9NP62 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GCM1Q9NP62 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
GCM1Q9NP62 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GCM1Q9NP62 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GCM1Q9NP62 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GCM1Q9NP62 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GCM1Q9NP62 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GCM1Q9NP62 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.55■□□□□ 0.4
GCM1Q9NP62 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.55■□□□□ 0.4
GCM1Q9NP62 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
GCM1Q9NP62 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GCM1Q9NP62 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms