Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 KRT18P20-201ENST00000548986 1279 ntBASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 AP001160.3-201ENST00000601484 763 ntBASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEUROD4Q9HD90 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 KRT18P14-201ENST00000534205 1250 ntBASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 AC073314.1-201ENST00000568729 2216 ntBASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEUROD4Q9HD90 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NEUROD4Q9HD90 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NEUROD4Q9HD90 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.39■□□□□ 0.7
NEUROD4Q9HD90 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.39■□□□□ 0.7
NEUROD4Q9HD90 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NEUROD4Q9HD90 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 FP700111.2-201ENST00000619190 1892 ntBASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEUROD4Q9HD90 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEUROD4Q9HD90 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms