Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PIF1Q9H611 AC135279.3-201ENST00000610945 1311 ntBASIC19.64■□□□□ 0.73
PIF1Q9H611 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PIF1Q9H611 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PIF1Q9H611 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PIF1Q9H611 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
PIF1Q9H611 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PIF1Q9H611 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.64■□□□□ 0.73
PIF1Q9H611 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.63■□□□□ 0.73
PIF1Q9H611 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.63■□□□□ 0.73
PIF1Q9H611 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PIF1Q9H611 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PIF1Q9H611 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PIF1Q9H611 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PIF1Q9H611 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PIF1Q9H611 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PIF1Q9H611 AC096631.2-201ENST00000436136 790 ntBASIC19.63■□□□□ 0.73
PIF1Q9H611 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PIF1Q9H611 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.63■□□□□ 0.73
PIF1Q9H611 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.63■□□□□ 0.73
PIF1Q9H611 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PIF1Q9H611 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.63■□□□□ 0.73
PIF1Q9H611 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PIF1Q9H611 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PIF1Q9H611 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.63■□□□□ 0.73
PIF1Q9H611 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PIF1Q9H611 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PIF1Q9H611 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.62■□□□□ 0.73
PIF1Q9H611 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PIF1Q9H611 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PIF1Q9H611 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PIF1Q9H611 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.62■□□□□ 0.73
PIF1Q9H611 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.62■□□□□ 0.73
PIF1Q9H611 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PIF1Q9H611 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PIF1Q9H611 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.62■□□□□ 0.73
PIF1Q9H611 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.62■□□□□ 0.73
PIF1Q9H611 AL139246.5-201ENST00000606645 996 ntBASIC19.62■□□□□ 0.73
PIF1Q9H611 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PIF1Q9H611 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PIF1Q9H611 AL512408.1-201ENST00000569378 2000 ntBASIC19.62■□□□□ 0.73
PIF1Q9H611 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PIF1Q9H611 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PIF1Q9H611 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PIF1Q9H611 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PIF1Q9H611 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PIF1Q9H611 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PIF1Q9H611 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.61■□□□□ 0.73
PIF1Q9H611 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
PIF1Q9H611 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PIF1Q9H611 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.61■□□□□ 0.73
PIF1Q9H611 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.61■□□□□ 0.73
PIF1Q9H611 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PIF1Q9H611 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PIF1Q9H611 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PIF1Q9H611 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.61■□□□□ 0.73
PIF1Q9H611 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.61■□□□□ 0.73
PIF1Q9H611 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PIF1Q9H611 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.61■□□□□ 0.73
PIF1Q9H611 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
PIF1Q9H611 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PIF1Q9H611 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PIF1Q9H611 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PIF1Q9H611 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PIF1Q9H611 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PIF1Q9H611 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PIF1Q9H611 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PIF1Q9H611 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PIF1Q9H611 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PIF1Q9H611 EDA-201ENST00000338901 1233 ntBASIC19.6■□□□□ 0.73
PIF1Q9H611 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PIF1Q9H611 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.6■□□□□ 0.73
PIF1Q9H611 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.6■□□□□ 0.73
PIF1Q9H611 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PIF1Q9H611 AC024257.2-201ENST00000549699 147 ntBASIC19.6■□□□□ 0.73
PIF1Q9H611 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.6■□□□□ 0.73
PIF1Q9H611 AC110285.6-201ENST00000617652 491 ntBASIC19.6■□□□□ 0.73
PIF1Q9H611 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.6■□□□□ 0.73
PIF1Q9H611 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PIF1Q9H611 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PIF1Q9H611 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PIF1Q9H611 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.6■□□□□ 0.73
PIF1Q9H611 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PIF1Q9H611 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PIF1Q9H611 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.6■□□□□ 0.73
PIF1Q9H611 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PIF1Q9H611 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PIF1Q9H611 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PIF1Q9H611 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.59■□□□□ 0.73
PIF1Q9H611 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.59■□□□□ 0.73
PIF1Q9H611 AC126544.1-201ENST00000580842 1059 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms