Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 AL136116.3-201ENST00000402907 1138 ntBASIC21.45■■□□□ 1.02
DDX47Q9H0S4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 AC105233.4-201ENST00000642045 216 ntBASIC21.45■■□□□ 1.02
DDX47Q9H0S4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 AC024257.2-201ENST00000549699 147 ntBASIC21.44■■□□□ 1.02
DDX47Q9H0S4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
DDX47Q9H0S4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 AC061975.6-201ENST00000579045 1553 ntBASIC21.43■■□□□ 1.02
DDX47Q9H0S4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX47Q9H0S4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX47Q9H0S4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX47Q9H0S4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.4■■□□□ 1.02
DDX47Q9H0S4 AL136162.1-201ENST00000607711 1078 ntBASIC21.4■■□□□ 1.02
DDX47Q9H0S4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms