Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRDL1Q9BU40 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHRDL1Q9BU40 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.32■□□□□ 0.2
CHRDL1Q9BU40 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.32■□□□□ 0.2
CHRDL1Q9BU40 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHRDL1Q9BU40 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHRDL1Q9BU40 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.32■□□□□ 0.2
CHRDL1Q9BU40 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHRDL1Q9BU40 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHRDL1Q9BU40 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 AL157384.1-201ENST00000445995 2473 ntBASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.31■□□□□ 0.2
CHRDL1Q9BU40 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 AL391422.3-201ENST00000603791 2761 ntBASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRDL1Q9BU40 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRDL1Q9BU40 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 AC027612.3-201ENST00000413684 1047 ntBASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRDL1Q9BU40 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms