Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.78■□□□□ 0.6
NPAS1Q99742 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS1Q99742 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS1Q99742 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
NPAS1Q99742 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS1Q99742 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 AC068338.2-201ENST00000563278 1430 ntBASIC18.77■□□□□ 0.6
NPAS1Q99742 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS1Q99742 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 CROCCP5-201ENST00000436658 830 ntBASIC18.77■□□□□ 0.6
NPAS1Q99742 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
NPAS1Q99742 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS1Q99742 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS1Q99742 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS1Q99742 AL050303.2-201ENST00000619798 666 ntBASIC18.77■□□□□ 0.6
NPAS1Q99742 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.77■□□□□ 0.6
NPAS1Q99742 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.77■□□□□ 0.6
NPAS1Q99742 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPAS1Q99742 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS1Q99742 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.77■□□□□ 0.59
NPAS1Q99742 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS1Q99742 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS1Q99742 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NPAS1Q99742 AC073130.3-201ENST00000624389 2278 ntBASIC18.76■□□□□ 0.59
NPAS1Q99742 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS1Q99742 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS1Q99742 AC090192.1-201ENST00000517740 490 ntBASIC18.76■□□□□ 0.59
NPAS1Q99742 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS1Q99742 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 AC016405.3-201ENST00000607710 860 ntBASIC18.76■□□□□ 0.59
NPAS1Q99742 AC013268.1-206ENST00000638368 961 ntBASIC18.76■□□□□ 0.59
NPAS1Q99742 AC112229.1-201ENST00000639295 961 ntBASIC18.76■□□□□ 0.59
NPAS1Q99742 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS1Q99742 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NPAS1Q99742 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.76■□□□□ 0.59
NPAS1Q99742 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPAS1Q99742 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.76■□□□□ 0.59
NPAS1Q99742 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NPAS1Q99742 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS1Q99742 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NPAS1Q99742 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS1Q99742 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.75■□□□□ 0.59
NPAS1Q99742 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS1Q99742 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS1Q99742 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS1Q99742 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.75■□□□□ 0.59
NPAS1Q99742 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.75■□□□□ 0.59
NPAS1Q99742 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS1Q99742 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NPAS1Q99742 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.75■□□□□ 0.59
NPAS1Q99742 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS1Q99742 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPAS1Q99742 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NPAS1Q99742 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 AL391422.3-201ENST00000603791 2761 ntBASIC18.74■□□□□ 0.59
NPAS1Q99742 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.74■□□□□ 0.59
NPAS1Q99742 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.74■□□□□ 0.59
NPAS1Q99742 AC007322.1-201ENST00000426983 750 ntBASIC18.74■□□□□ 0.59
NPAS1Q99742 AC026185.1-201ENST00000445748 174 ntBASIC18.74■□□□□ 0.59
NPAS1Q99742 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.74■□□□□ 0.59
NPAS1Q99742 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 AC231657.2-201ENST00000624556 255 ntBASIC18.74■□□□□ 0.59
NPAS1Q99742 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NPAS1Q99742 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
NPAS1Q99742 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.74■□□□□ 0.59
NPAS1Q99742 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NPAS1Q99742 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPAS1Q99742 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NPAS1Q99742 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPAS1Q99742 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms