Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 MIPEPP3-201ENST00000412105 444 ntBASIC21.31■■□□□ 1
PRICKLE1Q96MT3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.31■■□□□ 1
PRICKLE1Q96MT3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 AC007322.3-201ENST00000426526 701 ntBASIC21.3■■□□□ 1
PRICKLE1Q96MT3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.3■■□□□ 1
PRICKLE1Q96MT3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PRICKLE1Q96MT3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.29■■□□□ 1
PRICKLE1Q96MT3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE1Q96MT3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 AC069152.1-201ENST00000438030 544 ntBASIC21.28■■□□□ 1
PRICKLE1Q96MT3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE1Q96MT3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 BX276092.2-201ENST00000417668 665 ntBASIC21.27■■□□□ 1
PRICKLE1Q96MT3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 AC116050.2-201ENST00000612102 1779 ntBASIC21.27■■□□□ 1
PRICKLE1Q96MT3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE1Q96MT3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRICKLE1Q96MT3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PRICKLE1Q96MT3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PRICKLE1Q96MT3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRICKLE1Q96MT3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE1Q96MT3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE1Q96MT3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms