Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.4■■□□□ 1.5
CDCA5Q96FF9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDCA5Q96FF9 AC068473.5-201ENST00000616428 2072 ntBASIC24.4■■□□□ 1.5
CDCA5Q96FF9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC24.4■■□□□ 1.5
CDCA5Q96FF9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.4■■□□□ 1.5
CDCA5Q96FF9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.4■■□□□ 1.5
CDCA5Q96FF9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDCA5Q96FF9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDCA5Q96FF9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.4■■□□□ 1.5
CDCA5Q96FF9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
CDCA5Q96FF9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDCA5Q96FF9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.39■■□□□ 1.5
CDCA5Q96FF9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDCA5Q96FF9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
CDCA5Q96FF9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDCA5Q96FF9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CDCA5Q96FF9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
CDCA5Q96FF9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24.39■■□□□ 1.49
CDCA5Q96FF9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC24.39■■□□□ 1.49
CDCA5Q96FF9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CDCA5Q96FF9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.39■■□□□ 1.49
CDCA5Q96FF9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.39■■□□□ 1.49
CDCA5Q96FF9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDCA5Q96FF9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDCA5Q96FF9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CDCA5Q96FF9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.38■■□□□ 1.49
CDCA5Q96FF9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDCA5Q96FF9 AC010542.4-201ENST00000563151 1910 ntBASIC24.38■■□□□ 1.49
CDCA5Q96FF9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDCA5Q96FF9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDCA5Q96FF9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.38■■□□□ 1.49
CDCA5Q96FF9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.38■■□□□ 1.49
CDCA5Q96FF9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.38■■□□□ 1.49
CDCA5Q96FF9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
CDCA5Q96FF9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDCA5Q96FF9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 AC026471.5-201ENST00000615068 467 ntBASIC24.36■■□□□ 1.49
CDCA5Q96FF9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.36■■□□□ 1.49
CDCA5Q96FF9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 AC116050.2-201ENST00000612102 1779 ntBASIC24.35■■□□□ 1.49
CDCA5Q96FF9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
CDCA5Q96FF9 AC087633.2-202ENST00000565166 1439 ntBASIC24.35■■□□□ 1.49
CDCA5Q96FF9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 ARMC10P1-201ENST00000313754 855 ntBASIC24.34■■□□□ 1.49
CDCA5Q96FF9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDCA5Q96FF9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDCA5Q96FF9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDCA5Q96FF9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDCA5Q96FF9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDCA5Q96FF9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDCA5Q96FF9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDCA5Q96FF9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms