Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHD6Q8TD26 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.9■□□□□ 0.62
CHD6Q8TD26 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD6Q8TD26 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
CHD6Q8TD26 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
CHD6Q8TD26 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD6Q8TD26 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHD6Q8TD26 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHD6Q8TD26 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHD6Q8TD26 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CHD6Q8TD26 AC116562.2-201ENST00000507042 360 ntBASIC18.89■□□□□ 0.62
CHD6Q8TD26 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD6Q8TD26 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.89■□□□□ 0.62
CHD6Q8TD26 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.89■□□□□ 0.62
CHD6Q8TD26 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD6Q8TD26 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHD6Q8TD26 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD6Q8TD26 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.89■□□□□ 0.61
CHD6Q8TD26 IER3-202ENST00000376377 1350 ntBASIC18.89■□□□□ 0.61
CHD6Q8TD26 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD6Q8TD26 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.89■□□□□ 0.61
CHD6Q8TD26 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD6Q8TD26 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.89■□□□□ 0.61
CHD6Q8TD26 C2orf69P3-201ENST00000565542 1120 ntBASIC18.89■□□□□ 0.61
CHD6Q8TD26 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CHD6Q8TD26 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD6Q8TD26 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.89■□□□□ 0.61
CHD6Q8TD26 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHD6Q8TD26 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD6Q8TD26 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD6Q8TD26 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD6Q8TD26 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CHD6Q8TD26 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD6Q8TD26 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD6Q8TD26 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CHD6Q8TD26 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD6Q8TD26 AL845331.1-201ENST00000424978 1190 ntBASIC18.88■□□□□ 0.61
CHD6Q8TD26 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.88■□□□□ 0.61
CHD6Q8TD26 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHD6Q8TD26 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHD6Q8TD26 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.88■□□□□ 0.61
CHD6Q8TD26 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CHD6Q8TD26 AL353803.4-201ENST00000565882 1934 ntBASIC18.88■□□□□ 0.61
CHD6Q8TD26 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD6Q8TD26 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 FAM21FP-204ENST00000608637 956 ntBASIC18.87■□□□□ 0.61
CHD6Q8TD26 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHD6Q8TD26 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHD6Q8TD26 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CHD6Q8TD26 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD6Q8TD26 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.86■□□□□ 0.61
CHD6Q8TD26 AC117500.6-201ENST00000624871 588 ntBASIC18.86■□□□□ 0.61
CHD6Q8TD26 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD6Q8TD26 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD6Q8TD26 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.86■□□□□ 0.61
CHD6Q8TD26 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.85■□□□□ 0.61
CHD6Q8TD26 AC079630.1-202ENST00000618127 1840 ntBASIC18.85■□□□□ 0.61
CHD6Q8TD26 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.85■□□□□ 0.61
CHD6Q8TD26 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CHD6Q8TD26 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.85■□□□□ 0.61
CHD6Q8TD26 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD6Q8TD26 HTR7P1-201ENST00000538670 1336 ntBASIC18.85■□□□□ 0.61
CHD6Q8TD26 AC111152.3-201ENST00000569699 673 ntBASIC18.85■□□□□ 0.61
CHD6Q8TD26 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.85■□□□□ 0.61
CHD6Q8TD26 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHD6Q8TD26 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHD6Q8TD26 AC117947.1-201ENST00000427448 529 ntBASIC18.85■□□□□ 0.61
CHD6Q8TD26 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms