Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00311Q8N616 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00311Q8N616 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00311Q8N616 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC00311Q8N616 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 MIR2861-201ENST00000636310 90 ntBASIC16.73■□□□□ 0.27
LINC00311Q8N616 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.73■□□□□ 0.27
LINC00311Q8N616 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LINC00311Q8N616 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LINC00311Q8N616 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC00311Q8N616 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LINC00311Q8N616 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 DUX4L16-201ENST00000555130 1264 ntBASIC16.72■□□□□ 0.27
LINC00311Q8N616 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 AC011767.1-201ENST00000617410 1153 ntBASIC16.72■□□□□ 0.27
LINC00311Q8N616 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
LINC00311Q8N616 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LINC00311Q8N616 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 AC022517.1-201ENST00000592429 346 ntBASIC16.71■□□□□ 0.27
LINC00311Q8N616 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 BID-214ENST00000617586 542 ntTSL 5 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.71■□□□□ 0.27
LINC00311Q8N616 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LINC00311Q8N616 FEM1AP1-201ENST00000431297 1995 ntBASIC16.71■□□□□ 0.27
LINC00311Q8N616 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LINC00311Q8N616 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00311Q8N616 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00311Q8N616 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00311Q8N616 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00311Q8N616 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 MIR935-201ENST00000401179 91 ntBASIC16.7■□□□□ 0.26
LINC00311Q8N616 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00311Q8N616 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00311Q8N616 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00311Q8N616 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.7■□□□□ 0.26
LINC00311Q8N616 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LINC00311Q8N616 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms