Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 AC005224.4-201ENST00000583262 1652 ntBASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LRRTM1Q86UE6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRTM1Q86UE6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
LRRTM1Q86UE6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 TCF3P1-201ENST00000423021 1937 ntBASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRTM1Q86UE6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 IGHV3-19-201ENST00000521488 291 ntBASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 AC233992.3-201ENST00000607491 485 ntBASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRTM1Q86UE6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRTM1Q86UE6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.83■□□□□ 0.45
LRRTM1Q86UE6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRTM1Q86UE6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRRTM1Q86UE6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRTM1Q86UE6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.83■□□□□ 0.45
LRRTM1Q86UE6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms