Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC098590.1-201ENST00000468126 897 ntBASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 AC093827.2-201ENST00000512654 315 ntBASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 AC116050.2-201ENST00000612102 1779 ntBASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.68■□□□□ 0.26
C9orf139Q6ZV77 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 CYP21A1P-202ENST00000354927 1481 ntBASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 AP006294.2-201ENST00000641667 209 ntBASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf139Q6ZV77 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf139Q6ZV77 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 AC105020.6-201ENST00000621523 1217 ntBASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf139Q6ZV77 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
C9orf139Q6ZV77 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
C9orf139Q6ZV77 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 RPS2P52-201ENST00000469610 820 ntBASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 PNMA6B-201ENST00000538162 1200 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms