Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM60Q495X7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.81■■□□□ 1.24
TRIM60Q495X7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM60Q495X7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM60Q495X7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM60Q495X7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
TRIM60Q495X7 AC093323.1-202ENST00000635031 2045 ntBASIC22.81■■□□□ 1.24
TRIM60Q495X7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
TRIM60Q495X7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.8■■□□□ 1.24
TRIM60Q495X7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
TRIM60Q495X7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM60Q495X7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.8■■□□□ 1.24
TRIM60Q495X7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
TRIM60Q495X7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.8■■□□□ 1.24
TRIM60Q495X7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.8■■□□□ 1.24
TRIM60Q495X7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM60Q495X7 KRT18P35-201ENST00000510488 1269 ntBASIC22.8■■□□□ 1.24
TRIM60Q495X7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.8■■□□□ 1.24
TRIM60Q495X7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM60Q495X7 AC006557.6-201ENST00000623071 864 ntBASIC22.8■■□□□ 1.24
TRIM60Q495X7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.8■■□□□ 1.24
TRIM60Q495X7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM60Q495X7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
TRIM60Q495X7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM60Q495X7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM60Q495X7 AC026471.6-201ENST00000622954 1905 ntBASIC22.79■■□□□ 1.24
TRIM60Q495X7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM60Q495X7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
TRIM60Q495X7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.79■■□□□ 1.24
TRIM60Q495X7 RARRES2P10-201ENST00000564312 460 ntBASIC22.79■■□□□ 1.24
TRIM60Q495X7 RN7SL850P-201ENST00000579959 291 ntBASIC22.79■■□□□ 1.24
TRIM60Q495X7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.79■■□□□ 1.24
TRIM60Q495X7 CD177P1-201ENST00000606252 935 ntBASIC22.79■■□□□ 1.24
TRIM60Q495X7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
TRIM60Q495X7 AC092053.2-201ENST00000640557 1818 ntBASIC22.79■■□□□ 1.24
TRIM60Q495X7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
TRIM60Q495X7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.79■■□□□ 1.24
TRIM60Q495X7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
TRIM60Q495X7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
TRIM60Q495X7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
TRIM60Q495X7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.78■■□□□ 1.24
TRIM60Q495X7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.78■■□□□ 1.24
TRIM60Q495X7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.24
TRIM60Q495X7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
TRIM60Q495X7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.78■■□□□ 1.24
TRIM60Q495X7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.78■■□□□ 1.24
TRIM60Q495X7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.78■■□□□ 1.24
TRIM60Q495X7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
TRIM60Q495X7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
TRIM60Q495X7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.77■■□□□ 1.24
TRIM60Q495X7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
TRIM60Q495X7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TRIM60Q495X7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
TRIM60Q495X7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.77■■□□□ 1.24
TRIM60Q495X7 AL353708.3-201ENST00000610272 989 ntBASIC22.77■■□□□ 1.24
TRIM60Q495X7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.77■■□□□ 1.24
TRIM60Q495X7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
TRIM60Q495X7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM60Q495X7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
TRIM60Q495X7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM60Q495X7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.76■■□□□ 1.23
TRIM60Q495X7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM60Q495X7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM60Q495X7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
TRIM60Q495X7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.76■■□□□ 1.23
TRIM60Q495X7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM60Q495X7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.76■■□□□ 1.23
TRIM60Q495X7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM60Q495X7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
TRIM60Q495X7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM60Q495X7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.75■■□□□ 1.23
TRIM60Q495X7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.75■■□□□ 1.23
TRIM60Q495X7 AC005829.2-201ENST00000571422 1056 ntBASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms