Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 KRT18P6-201ENST00000555540 1265 ntBASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 AC142086.2-201ENST00000569753 217 ntBASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRFAM7AQ494W8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.96■□□□□ 0.46
CHRFAM7AQ494W8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.96■□□□□ 0.46
CHRFAM7AQ494W8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHRFAM7AQ494W8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRFAM7AQ494W8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 OXCT2P1-201ENST00000447263 1535 ntBASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 FAM201B-201ENST00000458407 597 ntBASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHRFAM7AQ494W8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRFAM7AQ494W8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 AC083906.2-201ENST00000511578 360 ntBASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 AIRN-201ENST00000601203 4374 ntBASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRFAM7AQ494W8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms