Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.71■□□□□ 0.27
SPCS3P61009 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.71■□□□□ 0.27
SPCS3P61009 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.71■□□□□ 0.27
SPCS3P61009 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.71■□□□□ 0.27
SPCS3P61009 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.71■□□□□ 0.27
SPCS3P61009 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.71■□□□□ 0.27
SPCS3P61009 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.71■□□□□ 0.27
SPCS3P61009 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SPCS3P61009 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.71■□□□□ 0.27
SPCS3P61009 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.71■□□□□ 0.27
SPCS3P61009 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPCS3P61009 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
SPCS3P61009 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.26
SPCS3P61009 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.7■□□□□ 0.26
SPCS3P61009 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 AC007225.1-201ENST00000566331 1836 ntBASIC16.7■□□□□ 0.26
SPCS3P61009 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.7■□□□□ 0.26
SPCS3P61009 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.7■□□□□ 0.26
SPCS3P61009 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SPCS3P61009 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SPCS3P61009 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.7■□□□□ 0.26
SPCS3P61009 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.7■□□□□ 0.26
SPCS3P61009 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPCS3P61009 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SPCS3P61009 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 AC055733.4-201ENST00000638462 1354 ntBASIC16.69■□□□□ 0.26
SPCS3P61009 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SPCS3P61009 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SPCS3P61009 AC131281.2-201ENST00000520478 145 ntBASIC16.69■□□□□ 0.26
SPCS3P61009 AC233992.3-201ENST00000607491 485 ntBASIC16.69■□□□□ 0.26
SPCS3P61009 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.69■□□□□ 0.26
SPCS3P61009 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SPCS3P61009 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.69■□□□□ 0.26
SPCS3P61009 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.68■□□□□ 0.26
SPCS3P61009 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SPCS3P61009 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SPCS3P61009 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 AC126544.1-201ENST00000580842 1059 ntBASIC16.68■□□□□ 0.26
SPCS3P61009 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.68■□□□□ 0.26
SPCS3P61009 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SPCS3P61009 AC027702.1-201ENST00000563810 1770 ntBASIC16.68■□□□□ 0.26
SPCS3P61009 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 AC020907.5-201ENST00000624372 1936 ntBASIC16.68■□□□□ 0.26
SPCS3P61009 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SPCS3P61009 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPCS3P61009 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SPCS3P61009 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.67■□□□□ 0.26
SPCS3P61009 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SPCS3P61009 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.67■□□□□ 0.26
SPCS3P61009 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms