Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRISP3P54108 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CRISP3P54108 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CRISP3P54108 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CRISP3P54108 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CRISP3P54108 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRISP3P54108 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.27■□□□□ 0.68
CRISP3P54108 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRISP3P54108 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRISP3P54108 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRISP3P54108 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CRISP3P54108 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRISP3P54108 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CRISP3P54108 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRISP3P54108 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CRISP3P54108 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CRISP3P54108 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CRISP3P54108 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.27■□□□□ 0.67
CRISP3P54108 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CRISP3P54108 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CRISP3P54108 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.27■□□□□ 0.67
CRISP3P54108 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CRISP3P54108 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CRISP3P54108 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CRISP3P54108 GABARAPL3-202ENST00000624044 1851 ntBASIC19.26■□□□□ 0.67
CRISP3P54108 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRISP3P54108 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CRISP3P54108 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.26■□□□□ 0.67
CRISP3P54108 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRISP3P54108 AC007952.6-201ENST00000573168 2673 ntBASIC19.26■□□□□ 0.67
CRISP3P54108 AC003957.1-201ENST00000625108 2673 ntBASIC19.26■□□□□ 0.67
CRISP3P54108 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CRISP3P54108 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRISP3P54108 AL391422.3-201ENST00000603791 2761 ntBASIC19.26■□□□□ 0.67
CRISP3P54108 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRISP3P54108 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRISP3P54108 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRISP3P54108 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRISP3P54108 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.26■□□□□ 0.67
CRISP3P54108 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CRISP3P54108 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRISP3P54108 AC011484.1-201ENST00000377652 1995 ntBASIC19.26■□□□□ 0.67
CRISP3P54108 AP005212.1-201ENST00000581547 1997 ntBASIC19.26■□□□□ 0.67
CRISP3P54108 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRISP3P54108 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.26■□□□□ 0.67
CRISP3P54108 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CRISP3P54108 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.26■□□□□ 0.67
CRISP3P54108 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.26■□□□□ 0.67
CRISP3P54108 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.25■□□□□ 0.67
CRISP3P54108 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CRISP3P54108 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.25■□□□□ 0.67
CRISP3P54108 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CRISP3P54108 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 AC138907.5-202ENST00000569484 235 ntBASIC19.25■□□□□ 0.67
CRISP3P54108 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 AC007225.1-201ENST00000566331 1836 ntBASIC19.25■□□□□ 0.67
CRISP3P54108 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CRISP3P54108 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CRISP3P54108 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CRISP3P54108 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CRISP3P54108 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.24■□□□□ 0.67
CRISP3P54108 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CRISP3P54108 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CRISP3P54108 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.24■□□□□ 0.67
CRISP3P54108 LINC02228-203ENST00000641970 1355 ntBASIC19.24■□□□□ 0.67
CRISP3P54108 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.24■□□□□ 0.67
CRISP3P54108 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.24■□□□□ 0.67
CRISP3P54108 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.24■□□□□ 0.67
CRISP3P54108 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CRISP3P54108 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.24■□□□□ 0.67
CRISP3P54108 AC120498.10-201ENST00000621827 505 ntBASIC19.24■□□□□ 0.67
CRISP3P54108 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CRISP3P54108 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CRISP3P54108 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CRISP3P54108 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CRISP3P54108 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CRISP3P54108 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRISP3P54108 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.23■□□□□ 0.67
CRISP3P54108 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.23■□□□□ 0.67
CRISP3P54108 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CRISP3P54108 AC073314.1-201ENST00000568729 2216 ntBASIC19.23■□□□□ 0.67
CRISP3P54108 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.23■□□□□ 0.67
CRISP3P54108 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.23■□□□□ 0.67
CRISP3P54108 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CRISP3P54108 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CRISP3P54108 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.23■□□□□ 0.67
CRISP3P54108 KRT16P2-201ENST00000414673 1423 ntBASIC19.23■□□□□ 0.67
CRISP3P54108 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRISP3P54108 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.23■□□□□ 0.67
CRISP3P54108 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms