Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LIMK2P53671 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LIMK2P53671 AC073314.1-201ENST00000568729 2216 ntBASIC20.79■□□□□ 0.92
LIMK2P53671 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LIMK2P53671 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.79■□□□□ 0.92
LIMK2P53671 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
LIMK2P53671 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LIMK2P53671 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LIMK2P53671 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LIMK2P53671 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIMK2P53671 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIMK2P53671 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.78■□□□□ 0.92
LIMK2P53671 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LIMK2P53671 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.78■□□□□ 0.92
LIMK2P53671 HLA-L-209ENST00000420110 1011 ntBASIC20.78■□□□□ 0.92
LIMK2P53671 AC026185.1-201ENST00000445748 174 ntBASIC20.78■□□□□ 0.92
LIMK2P53671 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LIMK2P53671 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.78■□□□□ 0.92
LIMK2P53671 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.78■□□□□ 0.92
LIMK2P53671 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIMK2P53671 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIMK2P53671 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIMK2P53671 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LIMK2P53671 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LIMK2P53671 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIMK2P53671 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LIMK2P53671 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LIMK2P53671 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LIMK2P53671 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.77■□□□□ 0.92
LIMK2P53671 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LIMK2P53671 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.77■□□□□ 0.92
LIMK2P53671 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LIMK2P53671 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
LIMK2P53671 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LIMK2P53671 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.77■□□□□ 0.92
LIMK2P53671 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.77■□□□□ 0.92
LIMK2P53671 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LIMK2P53671 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LIMK2P53671 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.77■□□□□ 0.92
LIMK2P53671 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LIMK2P53671 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
LIMK2P53671 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LIMK2P53671 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIMK2P53671 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIMK2P53671 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIMK2P53671 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIMK2P53671 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIMK2P53671 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.76■□□□□ 0.91
LIMK2P53671 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIMK2P53671 EEF1DP3-203ENST00000566025 782 ntBASIC20.76■□□□□ 0.91
LIMK2P53671 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIMK2P53671 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIMK2P53671 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
LIMK2P53671 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.76■□□□□ 0.91
LIMK2P53671 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LIMK2P53671 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LIMK2P53671 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.76■□□□□ 0.91
LIMK2P53671 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LIMK2P53671 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LIMK2P53671 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIMK2P53671 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIMK2P53671 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIMK2P53671 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIMK2P53671 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIMK2P53671 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LIMK2P53671 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.75■□□□□ 0.91
LIMK2P53671 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.75■□□□□ 0.91
LIMK2P53671 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.75■□□□□ 0.91
LIMK2P53671 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.75■□□□□ 0.91
LIMK2P53671 AC053503.5-201ENST00000601508 636 ntBASIC20.75■□□□□ 0.91
LIMK2P53671 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIMK2P53671 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.75■□□□□ 0.91
LIMK2P53671 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
LIMK2P53671 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIMK2P53671 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIMK2P53671 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LIMK2P53671 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIMK2P53671 KRT87P-202ENST00000534226 1464 ntBASIC20.75■□□□□ 0.91
LIMK2P53671 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIMK2P53671 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIMK2P53671 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIMK2P53671 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LIMK2P53671 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LIMK2P53671 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIMK2P53671 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.74■□□□□ 0.91
LIMK2P53671 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LIMK2P53671 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.74■□□□□ 0.91
LIMK2P53671 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.74■□□□□ 0.91
LIMK2P53671 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.74■□□□□ 0.91
LIMK2P53671 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.74■□□□□ 0.91
LIMK2P53671 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LIMK2P53671 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
LIMK2P53671 AC011767.1-201ENST00000617410 1153 ntBASIC20.74■□□□□ 0.91
LIMK2P53671 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.74■□□□□ 0.91
LIMK2P53671 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LIMK2P53671 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIMK2P53671 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LIMK2P53671 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LIMK2P53671 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LIMK2P53671 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms