Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2JP52435 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.72■□□□□ 0.75
POLR2JP52435 AC112907.3-201ENST00000577781 2400 ntBASIC19.72■□□□□ 0.75
POLR2JP52435 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2JP52435 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLR2JP52435 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.71■□□□□ 0.75
POLR2JP52435 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR2JP52435 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR2JP52435 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2JP52435 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2JP52435 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
POLR2JP52435 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2JP52435 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2JP52435 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2JP52435 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.71■□□□□ 0.75
POLR2JP52435 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2JP52435 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.71■□□□□ 0.75
POLR2JP52435 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
POLR2JP52435 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2JP52435 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
POLR2JP52435 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
POLR2JP52435 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2JP52435 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLR2JP52435 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2JP52435 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2JP52435 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.7■□□□□ 0.74
POLR2JP52435 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2JP52435 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
POLR2JP52435 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.7■□□□□ 0.74
POLR2JP52435 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
POLR2JP52435 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
POLR2JP52435 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2JP52435 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
POLR2JP52435 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2JP52435 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2JP52435 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLR2JP52435 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
POLR2JP52435 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2JP52435 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2JP52435 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2JP52435 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.69■□□□□ 0.74
POLR2JP52435 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
POLR2JP52435 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2JP52435 MIR572-201ENST00000384983 95 ntBASIC19.69■□□□□ 0.74
POLR2JP52435 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
POLR2JP52435 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2JP52435 AC007952.6-201ENST00000573168 2673 ntBASIC19.69■□□□□ 0.74
POLR2JP52435 AC003957.1-201ENST00000625108 2673 ntBASIC19.69■□□□□ 0.74
POLR2JP52435 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2JP52435 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLR2JP52435 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.69■□□□□ 0.74
POLR2JP52435 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
POLR2JP52435 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
POLR2JP52435 AC099778.1-201ENST00000568593 1911 ntBASIC19.68■□□□□ 0.74
POLR2JP52435 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
POLR2JP52435 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.68■□□□□ 0.74
POLR2JP52435 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.68■□□□□ 0.74
POLR2JP52435 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.68■□□□□ 0.74
POLR2JP52435 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.68■□□□□ 0.74
POLR2JP52435 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.68■□□□□ 0.74
POLR2JP52435 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.68■□□□□ 0.74
POLR2JP52435 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.68■□□□□ 0.74
POLR2JP52435 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
POLR2JP52435 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
POLR2JP52435 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
POLR2JP52435 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR2JP52435 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.67■□□□□ 0.74
POLR2JP52435 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR2JP52435 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.67■□□□□ 0.74
POLR2JP52435 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR2JP52435 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR2JP52435 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
POLR2JP52435 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
POLR2JP52435 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
POLR2JP52435 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.67■□□□□ 0.74
POLR2JP52435 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
POLR2JP52435 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
POLR2JP52435 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR2JP52435 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR2JP52435 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR2JP52435 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR2JP52435 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.67■□□□□ 0.74
POLR2JP52435 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR2JP52435 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR2JP52435 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR2JP52435 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
POLR2JP52435 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR2JP52435 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.66■□□□□ 0.74
POLR2JP52435 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms