Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCP4P48539 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCP4P48539 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.34□□□□□ -0.11
PCP4P48539 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.34□□□□□ -0.11
PCP4P48539 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.34□□□□□ -0.11
PCP4P48539 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.34□□□□□ -0.11
PCP4P48539 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.34□□□□□ -0.11
PCP4P48539 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.34□□□□□ -0.11
PCP4P48539 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PCP4P48539 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.34□□□□□ -0.11
PCP4P48539 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCP4P48539 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCP4P48539 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCP4P48539 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.33□□□□□ -0.11
PCP4P48539 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.33□□□□□ -0.11
PCP4P48539 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
PCP4P48539 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCP4P48539 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.33□□□□□ -0.11
PCP4P48539 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCP4P48539 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCP4P48539 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.33□□□□□ -0.12
PCP4P48539 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCP4P48539 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PCP4P48539 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.33□□□□□ -0.12
PCP4P48539 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCP4P48539 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.33□□□□□ -0.12
PCP4P48539 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCP4P48539 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.33□□□□□ -0.12
PCP4P48539 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.33□□□□□ -0.12
PCP4P48539 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCP4P48539 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCP4P48539 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCP4P48539 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
PCP4P48539 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCP4P48539 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCP4P48539 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCP4P48539 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PCP4P48539 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCP4P48539 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.32□□□□□ -0.12
PCP4P48539 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PCP4P48539 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PCP4P48539 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 FLJ38576-201ENST00000623820 2459 ntBASIC14.32□□□□□ -0.12
PCP4P48539 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PCP4P48539 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.32□□□□□ -0.12
PCP4P48539 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.32□□□□□ -0.12
PCP4P48539 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
PCP4P48539 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PCP4P48539 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCP4P48539 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 LINC00554-201ENST00000564841 3011 ntBASIC14.31□□□□□ -0.12
PCP4P48539 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PCP4P48539 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms