Protein–RNA interactions for Protein: P40356

PGD1, Mediator of RNA polymerase II transcription subunit 3, yeastyeast

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGD1P40356 CUP1-2YHR055C 186 nt1.72□□□□□ -2.13
PGD1P40356 RFA3YJL173C 369 nt1.72□□□□□ -2.13
PGD1P40356 ATG10YLL042C 504 nt1.72□□□□□ -2.13
PGD1P40356 PEX27YOR193W 1131 nt1.72□□□□□ -2.13
PGD1P40356 CUP9YPL177C 921 nt1.72□□□□□ -2.13
PGD1P40356 SEC66YBR171W 621 nt1.72□□□□□ -2.13
PGD1P40356 SHG1YBR258C 429 nt1.72□□□□□ -2.13
PGD1P40356 FUS2YMR232W 2034 nt1.72□□□□□ -2.13
PGD1P40356 RLF2YPR018W 1821 nt1.72□□□□□ -2.13
PGD1P40356 LRE1YCL051W 1752 nt1.72□□□□□ -2.13
PGD1P40356 UBR1YGR184C 5853 nt1.71□□□□□ -2.14
PGD1P40356 YCR081C-AYCR081C-A 237 nt1.71□□□□□ -2.14
PGD1P40356 YDR381C-AYDR381C-A 345 nt1.71□□□□□ -2.14
PGD1P40356 OST5YGL226C-A 261 nt1.71□□□□□ -2.14
PGD1P40356 SVP26YHR181W 687 nt1.71□□□□□ -2.14
PGD1P40356 CTK2YJL006C 972 nt1.71□□□□□ -2.14
PGD1P40356 YLR154W-AYLR154W-A 186 nt1.71□□□□□ -2.14
PGD1P40356 TMA7YLR262C-A 195 nt1.71□□□□□ -2.14
PGD1P40356 PEX34YCL056C 435 nt1.71□□□□□ -2.14
PGD1P40356 SAP190YKR028W 3102 nt1.71□□□□□ -2.14
PGD1P40356 BFR1YOR198C 1413 nt1.71□□□□□ -2.14
PGD1P40356 RGA2YDR379W 3030 nt1.7□□□□□ -2.14
PGD1P40356 CDC60YPL160W 3273 nt1.7□□□□□ -2.14
PGD1P40356 YDL032WYDL032W 312 nt1.7□□□□□ -2.14
PGD1P40356 SRB7YDR308C 423 nt1.7□□□□□ -2.14
PGD1P40356 VAC8YEL013W 1737 nt1.7□□□□□ -2.14
PGD1P40356 COX13YGL191W 390 nt1.7□□□□□ -2.14
PGD1P40356 YHR022CYHR022C 771 nt1.7□□□□□ -2.14
PGD1P40356 PCL5YHR071W 690 nt1.7□□□□□ -2.14
PGD1P40356 CKA1YIL035C 1119 nt1.7□□□□□ -2.14
PGD1P40356 AIM19YIL087C 474 nt1.7□□□□□ -2.14
PGD1P40356 YBL062WYBL062W 381 nt1.7□□□□□ -2.14
PGD1P40356 ARR2YPR200C 393 nt1.7□□□□□ -2.14
PGD1P40356 UTP21YLR409C 2820 nt1.7□□□□□ -2.14
PGD1P40356 TRZ1YKR079C 2517 nt1.7□□□□□ -2.14
PGD1P40356 SLK19YOR195W 2466 nt1.69□□□□□ -2.14
PGD1P40356 YDR034C-CYDR034C-C 1317 nt1.69□□□□□ -2.14
PGD1P40356 YLR410W-AYLR410W-A 1317 nt1.69□□□□□ -2.14
PGD1P40356 DFG16YOR030W 1860 nt1.69□□□□□ -2.14
PGD1P40356 YDR262WYDR262W 819 nt1.69□□□□□ -2.14
PGD1P40356 GLC7YER133W 939 nt1.69□□□□□ -2.14
PGD1P40356 FYV4YHR059W 393 nt1.69□□□□□ -2.14
PGD1P40356 CMC1YKL137W 336 nt1.69□□□□□ -2.14
PGD1P40356 YPT52YKR014C 705 nt1.69□□□□□ -2.14
PGD1P40356 RNP1YLL046C 750 nt1.69□□□□□ -2.14
PGD1P40356 YIP3YNL044W 531 nt1.69□□□□□ -2.14
PGD1P40356 RRP15YPR143W 753 nt1.69□□□□□ -2.14
PGD1P40356 CUR1YPR158W 759 nt1.69□□□□□ -2.14
PGD1P40356 GPI17YDR434W 1605 nt1.69□□□□□ -2.14
PGD1P40356 PDR8YLR266C 2106 nt1.69□□□□□ -2.14
PGD1P40356 UTP22YGR090W 3714 nt1.68□□□□□ -2.14
PGD1P40356 RNH70YGR276C 1662 nt1.68□□□□□ -2.14
PGD1P40356 ATC1YDR184C 885 nt1.68□□□□□ -2.14
PGD1P40356 ADK1YDR226W 669 nt1.68□□□□□ -2.14
PGD1P40356 YEA4YEL004W 1029 nt1.68□□□□□ -2.14
PGD1P40356 YGR018CYGR018C 330 nt1.68□□□□□ -2.14
PGD1P40356 YHR210CYHR210C 1026 nt1.68□□□□□ -2.14
PGD1P40356 RLP24YLR009W 600 nt1.68□□□□□ -2.14
PGD1P40356 RPL16BYNL069C 597 nt1.68□□□□□ -2.14
PGD1P40356 SET2YJL168C 2202 nt1.68□□□□□ -2.14
PGD1P40356 CBF2YGR140W 2871 nt1.68□□□□□ -2.14
PGD1P40356 MGA2YIR033W 3342 nt1.68□□□□□ -2.14
PGD1P40356 ECM5YMR176W 4236 nt1.67□□□□□ -2.14
PGD1P40356 SRP1YNL189W 1629 nt1.67□□□□□ -2.14
PGD1P40356 SSP1YHR184W 1716 nt1.67□□□□□ -2.14
PGD1P40356 RAV2YDR202C 1056 nt1.67□□□□□ -2.14
PGD1P40356 ACB1YGR037C 264 nt1.67□□□□□ -2.14
PGD1P40356 AIM23YJL131C 1071 nt1.67□□□□□ -2.14
PGD1P40356 GPX1YKL026C 504 nt1.67□□□□□ -2.14
PGD1P40356 VPS51YKR020W 495 nt1.67□□□□□ -2.14
PGD1P40356 NEJ1YLR265C 1029 nt1.67□□□□□ -2.14
PGD1P40356 RRT16YNL105W 429 nt1.67□□□□□ -2.14
PGD1P40356 PEP12YOR036W 867 nt1.67□□□□□ -2.14
PGD1P40356 VAM3YOR106W 852 nt1.67□□□□□ -2.14
PGD1P40356 MF(ALPHA)1YPL187W 498 nt1.67□□□□□ -2.14
PGD1P40356 RTP1YMR185W 2946 nt1.67□□□□□ -2.14
PGD1P40356 MFB1YDR219C 1398 nt1.67□□□□□ -2.14
PGD1P40356 NGG1YDR176W 2109 nt1.67□□□□□ -2.14
PGD1P40356 ATG9YDL149W 2994 nt1.67□□□□□ -2.14
PGD1P40356 KAR1YNL188W 1302 nt1.66□□□□□ -2.14
PGD1P40356 YHR214C-BYHR214C-B 5382 nt1.66□□□□□ -2.14
PGD1P40356 YCR108CYCR108C 192 nt1.66□□□□□ -2.14
PGD1P40356 YGR053CYGR053C 852 nt1.66□□□□□ -2.14
PGD1P40356 tT(UGU)HtT(UGU)H 72 nt1.66□□□□□ -2.14
PGD1P40356 YLR257WYLR257W 966 nt1.66□□□□□ -2.14
PGD1P40356 RPS30AYLR287C-A 192 nt1.66□□□□□ -2.14
PGD1P40356 SGT1YOR057W 1188 nt1.66□□□□□ -2.14
PGD1P40356 APA1YCL050C 966 nt1.66□□□□□ -2.14
PGD1P40356 GDI1YER136W 1356 nt1.66□□□□□ -2.14
PGD1P40356 STI1YOR027W 1770 nt1.66□□□□□ -2.14
PGD1P40356 DAL5YJR152W 1632 nt1.66□□□□□ -2.14
PGD1P40356 CST9YLR394W 1449 nt1.66□□□□□ -2.14
PGD1P40356 SSE1YPL106C 2082 nt1.65□□□□□ -2.14
PGD1P40356 IPT1YDR072C 1584 nt1.65□□□□□ -2.15
PGD1P40356 RPS17BYDR447C 411 nt1.65□□□□□ -2.15
PGD1P40356 MIC19YFR011C 513 nt1.65□□□□□ -2.15
PGD1P40356 LSM12YHR121W 564 nt1.65□□□□□ -2.15
PGD1P40356 YJR020WYJR020W 333 nt1.65□□□□□ -2.15
PGD1P40356 MRPS8YMR158W 468 nt1.65□□□□□ -2.15
PGD1P40356 YPR145C-AYPR145C-A 237 nt1.65□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms