Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HTR1EP28566 AC020907.5-201ENST00000624372 1936 ntBASIC19.72■□□□□ 0.75
HTR1EP28566 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
HTR1EP28566 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTR1EP28566 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.71■□□□□ 0.75
HTR1EP28566 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HTR1EP28566 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HTR1EP28566 AP005435.1-201ENST00000529293 1178 ntBASIC19.71■□□□□ 0.75
HTR1EP28566 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HTR1EP28566 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.71■□□□□ 0.75
HTR1EP28566 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HTR1EP28566 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
HTR1EP28566 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1EP28566 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.71■□□□□ 0.75
HTR1EP28566 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.7■□□□□ 0.74
HTR1EP28566 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 AC007225.1-201ENST00000566331 1836 ntBASIC19.7■□□□□ 0.74
HTR1EP28566 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1EP28566 AC080038.1-201ENST00000611274 1154 ntBASIC19.7■□□□□ 0.74
HTR1EP28566 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.7■□□□□ 0.74
HTR1EP28566 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.7■□□□□ 0.74
HTR1EP28566 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.7■□□□□ 0.74
HTR1EP28566 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.7■□□□□ 0.74
HTR1EP28566 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HTR1EP28566 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1EP28566 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1EP28566 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.69■□□□□ 0.74
HTR1EP28566 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.69■□□□□ 0.74
HTR1EP28566 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.69■□□□□ 0.74
HTR1EP28566 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.69■□□□□ 0.74
HTR1EP28566 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.69■□□□□ 0.74
HTR1EP28566 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1EP28566 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1EP28566 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.68■□□□□ 0.74
HTR1EP28566 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HTR1EP28566 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.68■□□□□ 0.74
HTR1EP28566 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.68■□□□□ 0.74
HTR1EP28566 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
HTR1EP28566 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.68■□□□□ 0.74
HTR1EP28566 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.68■□□□□ 0.74
HTR1EP28566 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HTR1EP28566 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HTR1EP28566 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HTR1EP28566 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HTR1EP28566 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.68■□□□□ 0.74
HTR1EP28566 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HTR1EP28566 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HTR1EP28566 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.68■□□□□ 0.74
HTR1EP28566 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HTR1EP28566 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1EP28566 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
HTR1EP28566 AL391422.3-201ENST00000603791 2761 ntBASIC19.67■□□□□ 0.74
HTR1EP28566 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HTR1EP28566 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
HTR1EP28566 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR1EP28566 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1EP28566 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1EP28566 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1EP28566 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.67■□□□□ 0.74
HTR1EP28566 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.67■□□□□ 0.74
HTR1EP28566 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR1EP28566 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
HTR1EP28566 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR1EP28566 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1EP28566 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1EP28566 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR1EP28566 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1EP28566 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HTR1EP28566 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HTR1EP28566 AFG3L1P-217ENST00000557444 2447 ntBASIC19.66■□□□□ 0.74
HTR1EP28566 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms