Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
XPAP23025 AL512625.2-201ENST00000417533 625 ntBASIC20.8■□□□□ 0.92
XPAP23025 FAM21FP-204ENST00000608637 956 ntBASIC20.8■□□□□ 0.92
XPAP23025 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
XPAP23025 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.8■□□□□ 0.92
XPAP23025 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
XPAP23025 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
XPAP23025 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
XPAP23025 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.8■□□□□ 0.92
XPAP23025 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.8■□□□□ 0.92
XPAP23025 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.8■□□□□ 0.92
XPAP23025 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XPAP23025 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XPAP23025 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
XPAP23025 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
XPAP23025 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
XPAP23025 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.79■□□□□ 0.92
XPAP23025 AC093787.1-201ENST00000450396 207 ntBASIC20.79■□□□□ 0.92
XPAP23025 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.79■□□□□ 0.92
XPAP23025 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
XPAP23025 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.79■□□□□ 0.92
XPAP23025 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
XPAP23025 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XPAP23025 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
XPAP23025 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XPAP23025 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
XPAP23025 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
XPAP23025 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
XPAP23025 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
XPAP23025 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.79■□□□□ 0.92
XPAP23025 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
XPAP23025 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.78■□□□□ 0.92
XPAP23025 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.78■□□□□ 0.92
XPAP23025 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.78■□□□□ 0.92
XPAP23025 AC116050.2-201ENST00000612102 1779 ntBASIC20.78■□□□□ 0.92
XPAP23025 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
XPAP23025 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.78■□□□□ 0.92
XPAP23025 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.78■□□□□ 0.92
XPAP23025 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.78■□□□□ 0.92
XPAP23025 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
XPAP23025 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XPAP23025 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XPAP23025 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
XPAP23025 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.78■□□□□ 0.92
XPAP23025 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XPAP23025 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
XPAP23025 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
XPAP23025 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.78■□□□□ 0.92
XPAP23025 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
XPAP23025 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
XPAP23025 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
XPAP23025 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
XPAP23025 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
XPAP23025 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
XPAP23025 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
XPAP23025 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.77■□□□□ 0.92
XPAP23025 LINC00565-201ENST00000562710 2331 ntBASIC20.77■□□□□ 0.92
XPAP23025 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
XPAP23025 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
XPAP23025 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
XPAP23025 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
XPAP23025 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
XPAP23025 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.76■□□□□ 0.91
XPAP23025 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
XPAP23025 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
XPAP23025 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
XPAP23025 GUSBP6-202ENST00000438529 1198 ntBASIC20.76■□□□□ 0.91
XPAP23025 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.76■□□□□ 0.91
XPAP23025 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.76■□□□□ 0.91
XPAP23025 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
XPAP23025 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.76■□□□□ 0.91
XPAP23025 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
XPAP23025 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.76■□□□□ 0.91
XPAP23025 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.76■□□□□ 0.91
XPAP23025 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
XPAP23025 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
XPAP23025 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XPAP23025 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
XPAP23025 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XPAP23025 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XPAP23025 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.75■□□□□ 0.91
XPAP23025 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XPAP23025 BX276092.2-201ENST00000417668 665 ntBASIC20.75■□□□□ 0.91
XPAP23025 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.75■□□□□ 0.91
XPAP23025 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.75■□□□□ 0.91
XPAP23025 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.75■□□□□ 0.91
XPAP23025 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.75■□□□□ 0.91
XPAP23025 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.75■□□□□ 0.91
XPAP23025 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.75■□□□□ 0.91
XPAP23025 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XPAP23025 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.75■□□□□ 0.91
XPAP23025 AC010980.2-201ENST00000587099 1412 ntBASIC20.75■□□□□ 0.91
XPAP23025 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
XPAP23025 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
XPAP23025 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.75■□□□□ 0.91
XPAP23025 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XPAP23025 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
XPAP23025 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
XPAP23025 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
XPAP23025 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms