Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2AFXP16104 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.5■■□□□ 1.03
H2AFXP16104 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2AFXP16104 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.5■■□□□ 1.03
H2AFXP16104 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
H2AFXP16104 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.5■■□□□ 1.03
H2AFXP16104 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.5■■□□□ 1.03
H2AFXP16104 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.5■■□□□ 1.03
H2AFXP16104 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.5■■□□□ 1.03
H2AFXP16104 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.5■■□□□ 1.03
H2AFXP16104 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
H2AFXP16104 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
H2AFXP16104 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H2AFXP16104 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
H2AFXP16104 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
H2AFXP16104 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
H2AFXP16104 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.49■■□□□ 1.03
H2AFXP16104 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
H2AFXP16104 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
H2AFXP16104 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
H2AFXP16104 AL049812.1-201ENST00000432563 2267 ntBASIC21.49■■□□□ 1.03
H2AFXP16104 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
H2AFXP16104 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
H2AFXP16104 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.49■■□□□ 1.03
H2AFXP16104 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
H2AFXP16104 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
H2AFXP16104 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
H2AFXP16104 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.49■■□□□ 1.03
H2AFXP16104 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
H2AFXP16104 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
H2AFXP16104 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.49■■□□□ 1.03
H2AFXP16104 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.48■■□□□ 1.03
H2AFXP16104 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.48■■□□□ 1.03
H2AFXP16104 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
H2AFXP16104 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2AFXP16104 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2AFXP16104 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2AFXP16104 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
H2AFXP16104 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
H2AFXP16104 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2AFXP16104 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.48■■□□□ 1.03
H2AFXP16104 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.48■■□□□ 1.03
H2AFXP16104 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2AFXP16104 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
H2AFXP16104 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
H2AFXP16104 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H2AFXP16104 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
H2AFXP16104 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
H2AFXP16104 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.47■■□□□ 1.03
H2AFXP16104 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
H2AFXP16104 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
H2AFXP16104 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 AC005332.8-201ENST00000622750 2735 ntBASIC21.47■■□□□ 1.03
H2AFXP16104 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
H2AFXP16104 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
H2AFXP16104 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
H2AFXP16104 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
H2AFXP16104 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
H2AFXP16104 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
H2AFXP16104 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.46■■□□□ 1.03
H2AFXP16104 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
H2AFXP16104 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2AFXP16104 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2AFXP16104 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2AFXP16104 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.45■■□□□ 1.02
H2AFXP16104 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
H2AFXP16104 AC092720.2-201ENST00000602388 1665 ntBASIC21.45■■□□□ 1.02
H2AFXP16104 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H2AFXP16104 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
H2AFXP16104 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
H2AFXP16104 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
H2AFXP16104 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.45■■□□□ 1.02
H2AFXP16104 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2AFXP16104 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2AFXP16104 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
H2AFXP16104 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.44■■□□□ 1.02
H2AFXP16104 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.44■■□□□ 1.02
H2AFXP16104 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.44■■□□□ 1.02
H2AFXP16104 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
H2AFXP16104 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
H2AFXP16104 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
H2AFXP16104 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2AFXP16104 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.44■■□□□ 1.02
H2AFXP16104 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2AFXP16104 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2AFXP16104 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
H2AFXP16104 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
H2AFXP16104 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms