Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHGBP05060 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
CHGBP05060 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.89■■□□□ 1.58
CHGBP05060 AF201337.1-201ENST00000520239 748 ntBASIC24.89■■□□□ 1.58
CHGBP05060 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.89■■□□□ 1.58
CHGBP05060 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.89■■□□□ 1.58
CHGBP05060 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CHGBP05060 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CHGBP05060 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHGBP05060 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHGBP05060 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.89■■□□□ 1.57
CHGBP05060 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.89■■□□□ 1.57
CHGBP05060 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CHGBP05060 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CHGBP05060 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHGBP05060 AC116050.2-201ENST00000612102 1779 ntBASIC24.88■■□□□ 1.57
CHGBP05060 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHGBP05060 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CHGBP05060 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
CHGBP05060 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.88■■□□□ 1.57
CHGBP05060 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.88■■□□□ 1.57
CHGBP05060 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHGBP05060 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHGBP05060 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CHGBP05060 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.88■■□□□ 1.57
CHGBP05060 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHGBP05060 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHGBP05060 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHGBP05060 AC010980.2-201ENST00000587099 1412 ntBASIC24.87■■□□□ 1.57
CHGBP05060 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC24.87■■□□□ 1.57
CHGBP05060 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHGBP05060 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHGBP05060 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.87■■□□□ 1.57
CHGBP05060 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHGBP05060 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.87■■□□□ 1.57
CHGBP05060 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHGBP05060 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHGBP05060 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CHGBP05060 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHGBP05060 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHGBP05060 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHGBP05060 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CHGBP05060 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHGBP05060 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
CHGBP05060 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.86■■□□□ 1.57
CHGBP05060 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHGBP05060 AC007322.3-201ENST00000426526 701 ntBASIC24.86■■□□□ 1.57
CHGBP05060 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CHGBP05060 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHGBP05060 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CHGBP05060 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.85■■□□□ 1.57
CHGBP05060 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHGBP05060 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHGBP05060 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHGBP05060 AL355802.2-201ENST00000402069 882 ntBASIC24.85■■□□□ 1.57
CHGBP05060 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHGBP05060 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHGBP05060 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.85■■□□□ 1.57
CHGBP05060 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CHGBP05060 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.85■■□□□ 1.57
CHGBP05060 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHGBP05060 OR10C1-204ENST00000622521 1039 ntBASIC24.85■■□□□ 1.57
CHGBP05060 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHGBP05060 KRT17P1-201ENST00000399211 1546 ntBASIC24.85■■□□□ 1.57
CHGBP05060 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.85■■□□□ 1.57
CHGBP05060 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHGBP05060 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHGBP05060 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHGBP05060 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.84■■□□□ 1.57
CHGBP05060 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.84■■□□□ 1.57
CHGBP05060 AL162412.1-201ENST00000567129 965 ntBASIC24.84■■□□□ 1.57
CHGBP05060 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.84■■□□□ 1.57
CHGBP05060 FAM21FP-204ENST00000608637 956 ntBASIC24.84■■□□□ 1.57
CHGBP05060 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CHGBP05060 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHGBP05060 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHGBP05060 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHGBP05060 AC121338.2-201ENST00000622535 1744 ntBASIC24.83■■□□□ 1.57
CHGBP05060 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHGBP05060 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHGBP05060 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHGBP05060 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHGBP05060 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHGBP05060 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHGBP05060 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.83■■□□□ 1.57
CHGBP05060 AC011484.1-201ENST00000377652 1995 ntBASIC24.83■■□□□ 1.57
CHGBP05060 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CHGBP05060 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CHGBP05060 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CHGBP05060 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.83■■□□□ 1.56
CHGBP05060 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.56
CHGBP05060 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.82■■□□□ 1.56
CHGBP05060 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.82■■□□□ 1.56
CHGBP05060 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.82■■□□□ 1.56
CHGBP05060 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHGBP05060 MKRN4P-201ENST00000444706 1521 ntBASIC24.82■■□□□ 1.56
CHGBP05060 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.82■■□□□ 1.56
CHGBP05060 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.82■■□□□ 1.56
CHGBP05060 MIPEPP3-201ENST00000412105 444 ntBASIC24.82■■□□□ 1.56
CHGBP05060 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms