Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC087633.2-202ENST00000565166 1439 ntBASIC20.95■□□□□ 0.94
PDGFBP01127 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFBP01127 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFBP01127 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PDGFBP01127 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.94■□□□□ 0.94
PDGFBP01127 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.94■□□□□ 0.94
PDGFBP01127 NTF6B-201ENST00000591913 560 ntBASIC20.94■□□□□ 0.94
PDGFBP01127 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.94■□□□□ 0.94
PDGFBP01127 AC087742.1-201ENST00000575880 1738 ntBASIC20.94■□□□□ 0.94
PDGFBP01127 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
PDGFBP01127 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PDGFBP01127 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFBP01127 AC139530.1-201ENST00000575312 1977 ntBASIC20.94■□□□□ 0.94
PDGFBP01127 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFBP01127 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PDGFBP01127 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PDGFBP01127 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFBP01127 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.93■□□□□ 0.94
PDGFBP01127 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.93■□□□□ 0.94
PDGFBP01127 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFBP01127 AC005829.2-201ENST00000571422 1056 ntBASIC20.93■□□□□ 0.94
PDGFBP01127 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.93■□□□□ 0.94
PDGFBP01127 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.93■□□□□ 0.94
PDGFBP01127 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.93■□□□□ 0.94
PDGFBP01127 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFBP01127 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFBP01127 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFBP01127 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.93■□□□□ 0.94
PDGFBP01127 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.92■□□□□ 0.94
PDGFBP01127 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
PDGFBP01127 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 AC113347.1-201ENST00000413321 391 ntBASIC20.92■□□□□ 0.94
PDGFBP01127 FAM197Y1-201ENST00000421178 764 ntBASIC20.92■□□□□ 0.94
PDGFBP01127 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.92■□□□□ 0.94
PDGFBP01127 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.92■□□□□ 0.94
PDGFBP01127 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.92■□□□□ 0.94
PDGFBP01127 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.92■□□□□ 0.94
PDGFBP01127 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.92■□□□□ 0.94
PDGFBP01127 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PDGFBP01127 AF186192.3-201ENST00000583427 947 ntBASIC20.92■□□□□ 0.94
PDGFBP01127 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.92■□□□□ 0.94
PDGFBP01127 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.92■□□□□ 0.94
PDGFBP01127 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PDGFBP01127 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.92■□□□□ 0.94
PDGFBP01127 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PDGFBP01127 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFBP01127 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PDGFBP01127 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFBP01127 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFBP01127 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
PDGFBP01127 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFBP01127 AC079598.2-202ENST00000546624 1451 ntBASIC20.91■□□□□ 0.94
PDGFBP01127 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.91■□□□□ 0.94
PDGFBP01127 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.91■□□□□ 0.94
PDGFBP01127 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.91■□□□□ 0.94
PDGFBP01127 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.91■□□□□ 0.94
PDGFBP01127 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PDGFBP01127 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.9■□□□□ 0.94
PDGFBP01127 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFBP01127 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFBP01127 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFBP01127 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PDGFBP01127 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFBP01127 RBM17P1-201ENST00000453646 1190 ntBASIC20.9■□□□□ 0.94
PDGFBP01127 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PDGFBP01127 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.9■□□□□ 0.94
PDGFBP01127 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.9■□□□□ 0.94
PDGFBP01127 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
PDGFBP01127 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFBP01127 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PDGFBP01127 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFBP01127 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PDGFBP01127 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFBP01127 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.89■□□□□ 0.94
PDGFBP01127 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PDGFBP01127 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDGFBP01127 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.89■□□□□ 0.94
PDGFBP01127 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFBP01127 HTR7P1-201ENST00000538670 1336 ntBASIC20.89■□□□□ 0.93
PDGFBP01127 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.89■□□□□ 0.93
PDGFBP01127 TERF1P1-201ENST00000311003 1181 ntBASIC20.89■□□□□ 0.93
PDGFBP01127 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
PDGFBP01127 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.89■□□□□ 0.93
PDGFBP01127 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PDGFBP01127 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PDGFBP01127 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.89■□□□□ 0.93
PDGFBP01127 AP000525.1-201ENST00000608286 694 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms